Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 GUK1-208ENST00000366728 842 ntTSL 2 BASIC27.26■■□□□ 1.95
PCDHA4Q9UN74 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
PCDHA4Q9UN74 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC27.25■■□□□ 1.95
PCDHA4Q9UN74 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
PCDHA4Q9UN74 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC27.25■■□□□ 1.95
PCDHA4Q9UN74 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
PCDHA4Q9UN74 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC27.25■■□□□ 1.95
PCDHA4Q9UN74 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC27.25■■□□□ 1.95
PCDHA4Q9UN74 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
PCDHA4Q9UN74 AC020928.2-201ENST00000588717 2197 ntBASIC27.25■■□□□ 1.95
PCDHA4Q9UN74 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC27.24■■□□□ 1.95
PCDHA4Q9UN74 HYI-210ENST00000486909 905 ntTSL 5 BASIC27.24■■□□□ 1.95
PCDHA4Q9UN74 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC27.24■■□□□ 1.95
PCDHA4Q9UN74 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC27.24■■□□□ 1.95
PCDHA4Q9UN74 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
PCDHA4Q9UN74 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
PCDHA4Q9UN74 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
PCDHA4Q9UN74 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
PCDHA4Q9UN74 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
PCDHA4Q9UN74 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
PCDHA4Q9UN74 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC27.23■■□□□ 1.95
PCDHA4Q9UN74 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC27.23■■□□□ 1.95
PCDHA4Q9UN74 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC27.23■■□□□ 1.95
PCDHA4Q9UN74 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC27.23■■□□□ 1.95
PCDHA4Q9UN74 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC27.23■■□□□ 1.95
PCDHA4Q9UN74 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC27.23■■□□□ 1.95
PCDHA4Q9UN74 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
PCDHA4Q9UN74 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
PCDHA4Q9UN74 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
PCDHA4Q9UN74 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
PCDHA4Q9UN74 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC27.22■■□□□ 1.95
PCDHA4Q9UN74 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
PCDHA4Q9UN74 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC27.22■■□□□ 1.95
PCDHA4Q9UN74 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC27.22■■□□□ 1.95
PCDHA4Q9UN74 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
PCDHA4Q9UN74 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC27.21■■□□□ 1.95
PCDHA4Q9UN74 LONRF2P2-201ENST00000439212 571 ntBASIC27.21■■□□□ 1.95
PCDHA4Q9UN74 AC139795.1-202ENST00000500444 432 ntBASIC27.21■■□□□ 1.95
PCDHA4Q9UN74 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC27.21■■□□□ 1.95
PCDHA4Q9UN74 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
PCDHA4Q9UN74 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC27.2■■□□□ 1.95
PCDHA4Q9UN74 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
PCDHA4Q9UN74 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC27.2■■□□□ 1.94
PCDHA4Q9UN74 SLC6A10P-202ENST00000431994 2058 ntBASIC27.2■■□□□ 1.94
PCDHA4Q9UN74 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
PCDHA4Q9UN74 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
PCDHA4Q9UN74 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC27.19■■□□□ 1.94
PCDHA4Q9UN74 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
PCDHA4Q9UN74 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
PCDHA4Q9UN74 BHLHE23-202ENST00000612929 1109 ntBASIC27.18■■□□□ 1.94
PCDHA4Q9UN74 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC27.18■■□□□ 1.94
PCDHA4Q9UN74 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC27.18■■□□□ 1.94
PCDHA4Q9UN74 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
PCDHA4Q9UN74 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC27.18■■□□□ 1.94
PCDHA4Q9UN74 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
PCDHA4Q9UN74 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
PCDHA4Q9UN74 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
PCDHA4Q9UN74 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC27.17■■□□□ 1.94
PCDHA4Q9UN74 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
PCDHA4Q9UN74 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC27.17■■□□□ 1.94
PCDHA4Q9UN74 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC27.16■■□□□ 1.94
PCDHA4Q9UN74 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC27.16■■□□□ 1.94
PCDHA4Q9UN74 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC27.16■■□□□ 1.94
PCDHA4Q9UN74 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC27.16■■□□□ 1.94
PCDHA4Q9UN74 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC27.16■■□□□ 1.94
PCDHA4Q9UN74 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
PCDHA4Q9UN74 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC27.16■■□□□ 1.94
PCDHA4Q9UN74 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
PCDHA4Q9UN74 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC27.16■■□□□ 1.94
PCDHA4Q9UN74 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC27.16■■□□□ 1.94
PCDHA4Q9UN74 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
PCDHA4Q9UN74 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
PCDHA4Q9UN74 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
PCDHA4Q9UN74 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC27.15■■□□□ 1.94
PCDHA4Q9UN74 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC27.15■■□□□ 1.94
PCDHA4Q9UN74 AC074183.2-201ENST00000623112 922 ntBASIC27.15■■□□□ 1.94
PCDHA4Q9UN74 FOXO3B-201ENST00000395675 1928 ntBASIC27.14■■□□□ 1.94
PCDHA4Q9UN74 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC27.14■■□□□ 1.94
PCDHA4Q9UN74 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
PCDHA4Q9UN74 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC27.14■■□□□ 1.94
PCDHA4Q9UN74 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC27.14■■□□□ 1.94
PCDHA4Q9UN74 AC019171.1-201ENST00000601251 1056 ntBASIC27.14■■□□□ 1.94
PCDHA4Q9UN74 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
PCDHA4Q9UN74 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC27.14■■□□□ 1.93
PCDHA4Q9UN74 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
PCDHA4Q9UN74 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC27.13■■□□□ 1.93
PCDHA4Q9UN74 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
PCDHA4Q9UN74 MTX2-204ENST00000443241 799 ntTSL 3 BASIC27.13■■□□□ 1.93
PCDHA4Q9UN74 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
PCDHA4Q9UN74 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC27.13■■□□□ 1.93
PCDHA4Q9UN74 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
PCDHA4Q9UN74 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
PCDHA4Q9UN74 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC27.12■■□□□ 1.93
PCDHA4Q9UN74 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
PCDHA4Q9UN74 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC27.12■■□□□ 1.93
PCDHA4Q9UN74 AC010980.1-201ENST00000587192 1142 ntBASIC27.12■■□□□ 1.93
PCDHA4Q9UN74 PVT1_1.1-201ENST00000615125 194 ntBASIC27.12■■□□□ 1.93
PCDHA4Q9UN74 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC27.12■■□□□ 1.93
PCDHA4Q9UN74 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC27.12■■□□□ 1.93
PCDHA4Q9UN74 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms