Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
C12orf4Q9NQ89 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
C12orf4Q9NQ89 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.34■□□□□ 0.85
C12orf4Q9NQ89 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC20.34■□□□□ 0.85
C12orf4Q9NQ89 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
C12orf4Q9NQ89 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
C12orf4Q9NQ89 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
C12orf4Q9NQ89 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
C12orf4Q9NQ89 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
C12orf4Q9NQ89 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC20.33■□□□□ 0.85
C12orf4Q9NQ89 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
C12orf4Q9NQ89 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
C12orf4Q9NQ89 DUX4L11-201ENST00000611504 1267 ntBASIC20.33■□□□□ 0.85
C12orf4Q9NQ89 DUX4L12-201ENST00000614593 1267 ntBASIC20.33■□□□□ 0.85
C12orf4Q9NQ89 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
C12orf4Q9NQ89 DUX4L14-201ENST00000621227 1267 ntBASIC20.33■□□□□ 0.85
C12orf4Q9NQ89 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
C12orf4Q9NQ89 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
C12orf4Q9NQ89 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
C12orf4Q9NQ89 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC20.33■□□□□ 0.84
C12orf4Q9NQ89 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
C12orf4Q9NQ89 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC20.32■□□□□ 0.84
C12orf4Q9NQ89 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
C12orf4Q9NQ89 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
C12orf4Q9NQ89 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
C12orf4Q9NQ89 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
C12orf4Q9NQ89 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
C12orf4Q9NQ89 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
C12orf4Q9NQ89 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
C12orf4Q9NQ89 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
C12orf4Q9NQ89 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
C12orf4Q9NQ89 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC20.31■□□□□ 0.84
C12orf4Q9NQ89 AL359258.2-201ENST00000564063 1566 ntBASIC20.31■□□□□ 0.84
C12orf4Q9NQ89 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
C12orf4Q9NQ89 RPS2P35-201ENST00000443417 897 ntBASIC20.31■□□□□ 0.84
C12orf4Q9NQ89 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC20.31■□□□□ 0.84
C12orf4Q9NQ89 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
C12orf4Q9NQ89 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
C12orf4Q9NQ89 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
C12orf4Q9NQ89 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
C12orf4Q9NQ89 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
C12orf4Q9NQ89 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
C12orf4Q9NQ89 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
C12orf4Q9NQ89 CHST11-203ENST00000547956 936 ntTSL 2 BASIC20.3■□□□□ 0.84
C12orf4Q9NQ89 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC20.3■□□□□ 0.84
C12orf4Q9NQ89 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
C12orf4Q9NQ89 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
C12orf4Q9NQ89 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
C12orf4Q9NQ89 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
C12orf4Q9NQ89 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
C12orf4Q9NQ89 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
C12orf4Q9NQ89 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
C12orf4Q9NQ89 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
C12orf4Q9NQ89 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
C12orf4Q9NQ89 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
C12orf4Q9NQ89 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
C12orf4Q9NQ89 AC096887.2-201ENST00000623443 1957 ntBASIC20.29■□□□□ 0.84
C12orf4Q9NQ89 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
C12orf4Q9NQ89 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
C12orf4Q9NQ89 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
C12orf4Q9NQ89 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
C12orf4Q9NQ89 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC20.29■□□□□ 0.84
C12orf4Q9NQ89 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
C12orf4Q9NQ89 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
C12orf4Q9NQ89 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC20.28■□□□□ 0.84
C12orf4Q9NQ89 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
C12orf4Q9NQ89 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
C12orf4Q9NQ89 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
C12orf4Q9NQ89 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
C12orf4Q9NQ89 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC20.28■□□□□ 0.84
C12orf4Q9NQ89 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC20.28■□□□□ 0.84
C12orf4Q9NQ89 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.84
C12orf4Q9NQ89 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
C12orf4Q9NQ89 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
C12orf4Q9NQ89 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
C12orf4Q9NQ89 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
C12orf4Q9NQ89 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
C12orf4Q9NQ89 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
C12orf4Q9NQ89 HES6-205ENST00000409356 528 ntTSL 2 BASIC20.27■□□□□ 0.84
C12orf4Q9NQ89 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC20.27■□□□□ 0.84
C12orf4Q9NQ89 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
C12orf4Q9NQ89 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
C12orf4Q9NQ89 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.27■□□□□ 0.84
C12orf4Q9NQ89 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
C12orf4Q9NQ89 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
C12orf4Q9NQ89 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
C12orf4Q9NQ89 AC022211.4-201ENST00000625094 2161 ntBASIC20.27■□□□□ 0.83
C12orf4Q9NQ89 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
C12orf4Q9NQ89 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
C12orf4Q9NQ89 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
C12orf4Q9NQ89 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
C12orf4Q9NQ89 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
C12orf4Q9NQ89 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC20.26■□□□□ 0.83
C12orf4Q9NQ89 AL359504.2-201ENST00000605506 1601 ntBASIC20.26■□□□□ 0.83
C12orf4Q9NQ89 RNF165-205ENST00000588679 2904 ntBASIC20.26■□□□□ 0.83
C12orf4Q9NQ89 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
C12orf4Q9NQ89 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
C12orf4Q9NQ89 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
C12orf4Q9NQ89 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
C12orf4Q9NQ89 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms