Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC35.06■■■■□ 3.2
SCAF1Q9H7N4 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC35.06■■■■□ 3.2
SCAF1Q9H7N4 TRIR-202ENST00000588213 841 ntTSL 3 BASIC35.06■■■■□ 3.2
SCAF1Q9H7N4 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC35.06■■■■□ 3.2
SCAF1Q9H7N4 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC35.05■■■■□ 3.2
SCAF1Q9H7N4 LONRF2P2-201ENST00000439212 571 ntBASIC35.05■■■■□ 3.2
SCAF1Q9H7N4 MTX2-204ENST00000443241 799 ntTSL 3 BASIC35.05■■■■□ 3.2
SCAF1Q9H7N4 UNC93B8-201ENST00000511903 705 ntBASIC35.05■■■■□ 3.2
SCAF1Q9H7N4 RARRES2P6-201ENST00000567333 442 ntBASIC35.05■■■■□ 3.2
SCAF1Q9H7N4 MIR4787-201ENST00000607364 84 ntBASIC35.05■■■■□ 3.2
SCAF1Q9H7N4 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC35.05■■■■□ 3.2
SCAF1Q9H7N4 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC35.04■■■■□ 3.2
SCAF1Q9H7N4 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC35.04■■■■□ 3.2
SCAF1Q9H7N4 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC35.04■■■■□ 3.2
SCAF1Q9H7N4 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC35.04■■■■□ 3.2
SCAF1Q9H7N4 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC35.03■■■■□ 3.2
SCAF1Q9H7N4 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC35.03■■■■□ 3.2
SCAF1Q9H7N4 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC35.03■■■■□ 3.2
SCAF1Q9H7N4 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC35.03■■■■□ 3.2
SCAF1Q9H7N4 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC35.03■■■■□ 3.2
SCAF1Q9H7N4 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC35.02■■■■□ 3.2
SCAF1Q9H7N4 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC35.02■■■■□ 3.2
SCAF1Q9H7N4 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC35.02■■■■□ 3.2
SCAF1Q9H7N4 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC35.02■■■■□ 3.2
SCAF1Q9H7N4 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC35.02■■■■□ 3.2
SCAF1Q9H7N4 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC35.02■■■■□ 3.2
SCAF1Q9H7N4 AC005837.3-201ENST00000612163 286 ntBASIC35.02■■■■□ 3.2
SCAF1Q9H7N4 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC35.02■■■■□ 3.2
SCAF1Q9H7N4 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC35.02■■■■□ 3.2
SCAF1Q9H7N4 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC35.01■■■■□ 3.2
SCAF1Q9H7N4 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC35.01■■■■□ 3.19
SCAF1Q9H7N4 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC35■■■■□ 3.19
SCAF1Q9H7N4 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC35■■■■□ 3.19
SCAF1Q9H7N4 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC35■■■■□ 3.19
SCAF1Q9H7N4 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC35■■■■□ 3.19
SCAF1Q9H7N4 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC35■■■■□ 3.19
SCAF1Q9H7N4 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC35■■■■□ 3.19
SCAF1Q9H7N4 IDNK-203ENST00000405990 629 ntTSL 2 BASIC35■■■■□ 3.19
SCAF1Q9H7N4 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC35■■■■□ 3.19
SCAF1Q9H7N4 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC35■■■■□ 3.19
SCAF1Q9H7N4 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC35■■■■□ 3.19
SCAF1Q9H7N4 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC34.99■■■■□ 3.19
SCAF1Q9H7N4 GUK1-205ENST00000366722 850 ntTSL 3 BASIC34.99■■■■□ 3.19
SCAF1Q9H7N4 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC34.99■■■■□ 3.19
SCAF1Q9H7N4 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC34.99■■■■□ 3.19
SCAF1Q9H7N4 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC34.99■■■■□ 3.19
SCAF1Q9H7N4 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC34.98■■■■□ 3.19
SCAF1Q9H7N4 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC34.98■■■■□ 3.19
SCAF1Q9H7N4 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC34.98■■■■□ 3.19
SCAF1Q9H7N4 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC34.98■■■■□ 3.19
SCAF1Q9H7N4 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC34.98■■■■□ 3.19
SCAF1Q9H7N4 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC34.97■■■■□ 3.19
SCAF1Q9H7N4 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC34.97■■■■□ 3.19
SCAF1Q9H7N4 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC34.96■■■■□ 3.19
SCAF1Q9H7N4 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC34.96■■■■□ 3.19
SCAF1Q9H7N4 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC34.96■■■■□ 3.19
SCAF1Q9H7N4 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC34.96■■■■□ 3.19
SCAF1Q9H7N4 AC104564.3-201ENST00000582367 638 ntBASIC34.96■■■■□ 3.19
SCAF1Q9H7N4 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC34.95■■■■□ 3.19
SCAF1Q9H7N4 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC34.95■■■■□ 3.19
SCAF1Q9H7N4 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC34.95■■■■□ 3.19
SCAF1Q9H7N4 AC110285.6-201ENST00000617652 491 ntBASIC34.95■■■■□ 3.19
SCAF1Q9H7N4 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC34.95■■■■□ 3.19
SCAF1Q9H7N4 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC34.95■■■■□ 3.18
SCAF1Q9H7N4 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC34.94■■■■□ 3.18
SCAF1Q9H7N4 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC34.94■■■■□ 3.18
SCAF1Q9H7N4 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC34.94■■■■□ 3.18
SCAF1Q9H7N4 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC34.94■■■■□ 3.18
SCAF1Q9H7N4 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC34.94■■■■□ 3.18
SCAF1Q9H7N4 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC34.93■■■■□ 3.18
SCAF1Q9H7N4 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC34.93■■■■□ 3.18
SCAF1Q9H7N4 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC34.93■■■■□ 3.18
SCAF1Q9H7N4 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC34.93■■■■□ 3.18
SCAF1Q9H7N4 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC34.93■■■■□ 3.18
SCAF1Q9H7N4 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC34.93■■■■□ 3.18
SCAF1Q9H7N4 AL136116.3-201ENST00000402907 1138 ntBASIC34.93■■■■□ 3.18
SCAF1Q9H7N4 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC34.92■■■■□ 3.18
SCAF1Q9H7N4 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC34.92■■■■□ 3.18
SCAF1Q9H7N4 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC34.92■■■■□ 3.18
SCAF1Q9H7N4 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC34.92■■■■□ 3.18
SCAF1Q9H7N4 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC34.92■■■■□ 3.18
SCAF1Q9H7N4 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC34.92■■■■□ 3.18
SCAF1Q9H7N4 AC131281.2-201ENST00000520478 145 ntBASIC34.92■■■■□ 3.18
SCAF1Q9H7N4 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC34.92■■■■□ 3.18
SCAF1Q9H7N4 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC34.92■■■■□ 3.18
SCAF1Q9H7N4 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC34.91■■■■□ 3.18
SCAF1Q9H7N4 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC34.91■■■■□ 3.18
SCAF1Q9H7N4 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC34.91■■■■□ 3.18
SCAF1Q9H7N4 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC34.91■■■■□ 3.18
SCAF1Q9H7N4 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC34.9■■■■□ 3.18
SCAF1Q9H7N4 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC34.9■■■■□ 3.18
SCAF1Q9H7N4 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC34.89■■■■□ 3.18
SCAF1Q9H7N4 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC34.89■■■■□ 3.18
SCAF1Q9H7N4 MIR3960-201ENST00000583311 91 ntBASIC34.89■■■■□ 3.18
SCAF1Q9H7N4 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC34.89■■■■□ 3.18
SCAF1Q9H7N4 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC34.89■■■■□ 3.18
SCAF1Q9H7N4 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC34.89■■■■□ 3.18
SCAF1Q9H7N4 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC34.89■■■■□ 3.18
SCAF1Q9H7N4 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC34.88■■■■□ 3.17
SCAF1Q9H7N4 BX664725.1-201ENST00000438252 379 ntBASIC34.88■■■■□ 3.17
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms