Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 GAK-223ENST00000628912 497 ntTSL 5 BASIC30.53■■■□□ 2.48
CNTNAP4Q9C0A0 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC30.53■■■□□ 2.48
CNTNAP4Q9C0A0 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC30.53■■■□□ 2.48
CNTNAP4Q9C0A0 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
CNTNAP4Q9C0A0 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC30.53■■■□□ 2.48
CNTNAP4Q9C0A0 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
CNTNAP4Q9C0A0 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC30.52■■■□□ 2.48
CNTNAP4Q9C0A0 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
CNTNAP4Q9C0A0 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC30.52■■■□□ 2.48
CNTNAP4Q9C0A0 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC30.52■■■□□ 2.48
CNTNAP4Q9C0A0 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
CNTNAP4Q9C0A0 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC30.51■■■□□ 2.48
CNTNAP4Q9C0A0 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC30.51■■■□□ 2.48
CNTNAP4Q9C0A0 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC30.51■■■□□ 2.48
CNTNAP4Q9C0A0 AL356740.2-201ENST00000601559 647 ntBASIC30.51■■■□□ 2.48
CNTNAP4Q9C0A0 EXOG-217ENST00000630638 197 ntTSL 5 BASIC30.51■■■□□ 2.48
CNTNAP4Q9C0A0 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC30.51■■■□□ 2.47
CNTNAP4Q9C0A0 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC30.51■■■□□ 2.47
CNTNAP4Q9C0A0 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC30.51■■■□□ 2.47
CNTNAP4Q9C0A0 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC30.51■■■□□ 2.47
CNTNAP4Q9C0A0 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC30.5■■■□□ 2.47
CNTNAP4Q9C0A0 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC30.5■■■□□ 2.47
CNTNAP4Q9C0A0 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
CNTNAP4Q9C0A0 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
CNTNAP4Q9C0A0 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC30.49■■■□□ 2.47
CNTNAP4Q9C0A0 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
CNTNAP4Q9C0A0 TK2-202ENST00000417693 1046 ntTSL 2 BASIC30.49■■■□□ 2.47
CNTNAP4Q9C0A0 AL512631.2-201ENST00000604634 923 ntBASIC30.49■■■□□ 2.47
CNTNAP4Q9C0A0 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC30.49■■■□□ 2.47
CNTNAP4Q9C0A0 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
CNTNAP4Q9C0A0 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC30.49■■■□□ 2.47
CNTNAP4Q9C0A0 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
CNTNAP4Q9C0A0 AC096631.2-201ENST00000436136 790 ntBASIC30.48■■■□□ 2.47
CNTNAP4Q9C0A0 QDPR-206ENST00000508623 601 ntTSL 3 BASIC30.48■■■□□ 2.47
CNTNAP4Q9C0A0 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
CNTNAP4Q9C0A0 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC30.47■■■□□ 2.47
CNTNAP4Q9C0A0 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
CNTNAP4Q9C0A0 AC005837.3-201ENST00000612163 286 ntBASIC30.47■■■□□ 2.47
CNTNAP4Q9C0A0 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC30.47■■■□□ 2.47
CNTNAP4Q9C0A0 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
CNTNAP4Q9C0A0 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
CNTNAP4Q9C0A0 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC30.46■■■□□ 2.47
CNTNAP4Q9C0A0 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC30.46■■■□□ 2.47
CNTNAP4Q9C0A0 ST7-202ENST00000323984 2142 ntTSL 5 BASIC30.46■■■□□ 2.47
CNTNAP4Q9C0A0 ST7-207ENST00000393449 2127 ntTSL 5 BASIC30.46■■■□□ 2.47
CNTNAP4Q9C0A0 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC30.46■■■□□ 2.47
CNTNAP4Q9C0A0 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC30.45■■■□□ 2.47
CNTNAP4Q9C0A0 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC30.45■■■□□ 2.47
CNTNAP4Q9C0A0 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
CNTNAP4Q9C0A0 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC30.45■■■□□ 2.46
CNTNAP4Q9C0A0 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC30.45■■■□□ 2.46
CNTNAP4Q9C0A0 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC30.45■■■□□ 2.46
CNTNAP4Q9C0A0 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC30.45■■■□□ 2.46
CNTNAP4Q9C0A0 AC133561.4-201ENST00000566112 224 ntBASIC30.45■■■□□ 2.46
CNTNAP4Q9C0A0 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
CNTNAP4Q9C0A0 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC30.44■■■□□ 2.46
CNTNAP4Q9C0A0 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC30.44■■■□□ 2.46
CNTNAP4Q9C0A0 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC30.44■■■□□ 2.46
CNTNAP4Q9C0A0 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC30.43■■■□□ 2.46
CNTNAP4Q9C0A0 AP004609.3-201ENST00000610705 1884 ntBASIC30.43■■■□□ 2.46
CNTNAP4Q9C0A0 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC30.42■■■□□ 2.46
CNTNAP4Q9C0A0 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
CNTNAP4Q9C0A0 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
CNTNAP4Q9C0A0 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC30.41■■■□□ 2.46
CNTNAP4Q9C0A0 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
CNTNAP4Q9C0A0 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC30.4■■■□□ 2.46
CNTNAP4Q9C0A0 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC30.4■■■□□ 2.46
CNTNAP4Q9C0A0 RASSF1-AS1-201ENST00000629828 790 ntBASIC30.4■■■□□ 2.46
CNTNAP4Q9C0A0 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC30.4■■■□□ 2.46
CNTNAP4Q9C0A0 AF131216.4-201ENST00000638924 1588 ntBASIC30.4■■■□□ 2.46
CNTNAP4Q9C0A0 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC30.39■■■□□ 2.46
CNTNAP4Q9C0A0 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC30.39■■■□□ 2.46
CNTNAP4Q9C0A0 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
CNTNAP4Q9C0A0 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC30.39■■■□□ 2.46
CNTNAP4Q9C0A0 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC30.39■■■□□ 2.46
CNTNAP4Q9C0A0 CLTA-210ENST00000540080 989 ntTSL 2 BASIC30.39■■■□□ 2.46
CNTNAP4Q9C0A0 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC30.39■■■□□ 2.45
CNTNAP4Q9C0A0 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
CNTNAP4Q9C0A0 AK3-203ENST00000447596 705 ntTSL 2 BASIC30.38■■■□□ 2.45
CNTNAP4Q9C0A0 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC30.38■■■□□ 2.45
CNTNAP4Q9C0A0 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC30.38■■■□□ 2.45
CNTNAP4Q9C0A0 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC30.38■■■□□ 2.45
CNTNAP4Q9C0A0 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
CNTNAP4Q9C0A0 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC30.37■■■□□ 2.45
CNTNAP4Q9C0A0 SNAI3-AS1-204ENST00000567997 2048 ntBASIC30.37■■■□□ 2.45
CNTNAP4Q9C0A0 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
CNTNAP4Q9C0A0 CD72-202ENST00000378430 585 ntTSL 3 BASIC30.37■■■□□ 2.45
CNTNAP4Q9C0A0 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC30.37■■■□□ 2.45
CNTNAP4Q9C0A0 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC30.36■■■□□ 2.45
CNTNAP4Q9C0A0 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
CNTNAP4Q9C0A0 SSSCA1-AS1-201ENST00000567594 614 ntBASIC30.36■■■□□ 2.45
CNTNAP4Q9C0A0 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC30.36■■■□□ 2.45
CNTNAP4Q9C0A0 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC30.36■■■□□ 2.45
CNTNAP4Q9C0A0 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
CNTNAP4Q9C0A0 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC30.35■■■□□ 2.45
CNTNAP4Q9C0A0 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC30.34■■■□□ 2.45
CNTNAP4Q9C0A0 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC30.34■■■□□ 2.45
CNTNAP4Q9C0A0 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
CNTNAP4Q9C0A0 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
CNTNAP4Q9C0A0 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC30.33■■■□□ 2.45
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms