Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
KRTAP3-1Q9BYR8 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
KRTAP3-1Q9BYR8 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
KRTAP3-1Q9BYR8 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
KRTAP3-1Q9BYR8 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
KRTAP3-1Q9BYR8 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
KRTAP3-1Q9BYR8 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
KRTAP3-1Q9BYR8 AC004812.2-201ENST00000611079 2094 ntBASIC12.06□□□□□ -0.48
KRTAP3-1Q9BYR8 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
KRTAP3-1Q9BYR8 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
KRTAP3-1Q9BYR8 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
KRTAP3-1Q9BYR8 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
KRTAP3-1Q9BYR8 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
KRTAP3-1Q9BYR8 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
KRTAP3-1Q9BYR8 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
KRTAP3-1Q9BYR8 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
KRTAP3-1Q9BYR8 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
KRTAP3-1Q9BYR8 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
KRTAP3-1Q9BYR8 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
KRTAP3-1Q9BYR8 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
KRTAP3-1Q9BYR8 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
KRTAP3-1Q9BYR8 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
KRTAP3-1Q9BYR8 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
KRTAP3-1Q9BYR8 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
KRTAP3-1Q9BYR8 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC12.05□□□□□ -0.48
KRTAP3-1Q9BYR8 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
KRTAP3-1Q9BYR8 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
KRTAP3-1Q9BYR8 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
KRTAP3-1Q9BYR8 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
KRTAP3-1Q9BYR8 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC12.05□□□□□ -0.48
KRTAP3-1Q9BYR8 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
KRTAP3-1Q9BYR8 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
KRTAP3-1Q9BYR8 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
KRTAP3-1Q9BYR8 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC12.05□□□□□ -0.48
KRTAP3-1Q9BYR8 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
KRTAP3-1Q9BYR8 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC12.04□□□□□ -0.48
KRTAP3-1Q9BYR8 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC12.04□□□□□ -0.48
KRTAP3-1Q9BYR8 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC12.04□□□□□ -0.48
KRTAP3-1Q9BYR8 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
KRTAP3-1Q9BYR8 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
KRTAP3-1Q9BYR8 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC12.04□□□□□ -0.48
KRTAP3-1Q9BYR8 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC12.04□□□□□ -0.48
KRTAP3-1Q9BYR8 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC12.04□□□□□ -0.48
KRTAP3-1Q9BYR8 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
KRTAP3-1Q9BYR8 AC141586.4-201ENST00000624558 1573 ntBASIC12.04□□□□□ -0.48
KRTAP3-1Q9BYR8 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
KRTAP3-1Q9BYR8 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
KRTAP3-1Q9BYR8 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
KRTAP3-1Q9BYR8 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
KRTAP3-1Q9BYR8 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
KRTAP3-1Q9BYR8 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
KRTAP3-1Q9BYR8 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
KRTAP3-1Q9BYR8 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
KRTAP3-1Q9BYR8 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
KRTAP3-1Q9BYR8 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
KRTAP3-1Q9BYR8 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
KRTAP3-1Q9BYR8 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC12.03□□□□□ -0.48
KRTAP3-1Q9BYR8 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
KRTAP3-1Q9BYR8 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
KRTAP3-1Q9BYR8 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
KRTAP3-1Q9BYR8 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
KRTAP3-1Q9BYR8 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC12.02□□□□□ -0.48
KRTAP3-1Q9BYR8 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
KRTAP3-1Q9BYR8 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
KRTAP3-1Q9BYR8 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC12.02□□□□□ -0.49
KRTAP3-1Q9BYR8 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
KRTAP3-1Q9BYR8 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
KRTAP3-1Q9BYR8 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
KRTAP3-1Q9BYR8 DUX4L11-201ENST00000611504 1267 ntBASIC12.02□□□□□ -0.49
KRTAP3-1Q9BYR8 DUX4L12-201ENST00000614593 1267 ntBASIC12.02□□□□□ -0.49
KRTAP3-1Q9BYR8 DUX4L14-201ENST00000621227 1267 ntBASIC12.02□□□□□ -0.49
KRTAP3-1Q9BYR8 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
KRTAP3-1Q9BYR8 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
KRTAP3-1Q9BYR8 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
KRTAP3-1Q9BYR8 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC12.02□□□□□ -0.49
KRTAP3-1Q9BYR8 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
KRTAP3-1Q9BYR8 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
KRTAP3-1Q9BYR8 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC12.01□□□□□ -0.49
KRTAP3-1Q9BYR8 HES6-205ENST00000409356 528 ntTSL 2 BASIC12.01□□□□□ -0.49
KRTAP3-1Q9BYR8 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC12.01□□□□□ -0.49
KRTAP3-1Q9BYR8 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
KRTAP3-1Q9BYR8 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC12□□□□□ -0.49
KRTAP3-1Q9BYR8 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC12□□□□□ -0.49
KRTAP3-1Q9BYR8 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
KRTAP3-1Q9BYR8 ME2-208ENST00000638937 2471 ntTSL 5 BASIC12□□□□□ -0.49
KRTAP3-1Q9BYR8 DUSP8P5-201ENST00000422884 1815 ntBASIC12□□□□□ -0.49
KRTAP3-1Q9BYR8 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
KRTAP3-1Q9BYR8 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
KRTAP3-1Q9BYR8 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
KRTAP3-1Q9BYR8 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
KRTAP3-1Q9BYR8 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC12□□□□□ -0.49
KRTAP3-1Q9BYR8 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC12□□□□□ -0.49
KRTAP3-1Q9BYR8 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
KRTAP3-1Q9BYR8 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC12□□□□□ -0.49
KRTAP3-1Q9BYR8 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
KRTAP3-1Q9BYR8 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC12□□□□□ -0.49
KRTAP3-1Q9BYR8 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
KRTAP3-1Q9BYR8 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC12□□□□□ -0.49
KRTAP3-1Q9BYR8 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC11.99□□□□□ -0.49
KRTAP3-1Q9BYR8 ABCB10P4-201ENST00000566803 2184 ntBASIC11.99□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms