Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
FOXC2Q99958 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
FOXC2Q99958 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC20.15■□□□□ 0.82
FOXC2Q99958 PARL-206ENST00000435888 1098 ntTSL 5 BASIC20.15■□□□□ 0.82
FOXC2Q99958 SUDS3P1-201ENST00000505831 966 ntBASIC20.15■□□□□ 0.82
FOXC2Q99958 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC20.15■□□□□ 0.82
FOXC2Q99958 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC20.15■□□□□ 0.82
FOXC2Q99958 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
FOXC2Q99958 AC011551.1-201ENST00000614101 683 ntBASIC20.15■□□□□ 0.82
FOXC2Q99958 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
FOXC2Q99958 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC20.14■□□□□ 0.81
FOXC2Q99958 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
FOXC2Q99958 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
FOXC2Q99958 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
FOXC2Q99958 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
FOXC2Q99958 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
FOXC2Q99958 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
FOXC2Q99958 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC20.13■□□□□ 0.81
FOXC2Q99958 AL031432.3-201ENST00000607698 485 ntBASIC20.13■□□□□ 0.81
FOXC2Q99958 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.13■□□□□ 0.81
FOXC2Q99958 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
FOXC2Q99958 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
FOXC2Q99958 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.12■□□□□ 0.81
FOXC2Q99958 RASSF1-AS1-201ENST00000629828 790 ntBASIC20.12■□□□□ 0.81
FOXC2Q99958 UNC93B3-201ENST00000308076 687 ntBASIC20.11■□□□□ 0.81
FOXC2Q99958 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
FOXC2Q99958 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.11■□□□□ 0.81
FOXC2Q99958 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
FOXC2Q99958 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
FOXC2Q99958 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC20.11■□□□□ 0.81
FOXC2Q99958 GAK-223ENST00000628912 497 ntTSL 5 BASIC20.11■□□□□ 0.81
FOXC2Q99958 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
FOXC2Q99958 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
FOXC2Q99958 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC20.1■□□□□ 0.81
FOXC2Q99958 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
FOXC2Q99958 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
FOXC2Q99958 EDA-201ENST00000338901 1233 ntBASIC20.1■□□□□ 0.81
FOXC2Q99958 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
FOXC2Q99958 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC20.1■□□□□ 0.81
FOXC2Q99958 CLTA-210ENST00000540080 989 ntTSL 2 BASIC20.1■□□□□ 0.81
FOXC2Q99958 AL136162.1-201ENST00000607711 1078 ntBASIC20.1■□□□□ 0.81
FOXC2Q99958 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
FOXC2Q99958 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
FOXC2Q99958 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
FOXC2Q99958 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
FOXC2Q99958 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.09■□□□□ 0.81
FOXC2Q99958 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
FOXC2Q99958 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC20.09■□□□□ 0.81
FOXC2Q99958 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.09■□□□□ 0.81
FOXC2Q99958 AL355001.2-201ENST00000620617 1191 ntBASIC20.09■□□□□ 0.81
FOXC2Q99958 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
FOXC2Q99958 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
FOXC2Q99958 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
FOXC2Q99958 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
FOXC2Q99958 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
FOXC2Q99958 HYI-206ENST00000372434 1025 ntTSL 5 BASIC20.08■□□□□ 0.81
FOXC2Q99958 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
FOXC2Q99958 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
FOXC2Q99958 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.08■□□□□ 0.81
FOXC2Q99958 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
FOXC2Q99958 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
FOXC2Q99958 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
FOXC2Q99958 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
FOXC2Q99958 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.07■□□□□ 0.8
FOXC2Q99958 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.07■□□□□ 0.8
FOXC2Q99958 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.07■□□□□ 0.8
FOXC2Q99958 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
FOXC2Q99958 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.06■□□□□ 0.8
FOXC2Q99958 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC20.06■□□□□ 0.8
FOXC2Q99958 ANKRD20A6P-201ENST00000618763 204 ntBASIC20.06■□□□□ 0.8
FOXC2Q99958 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
FOXC2Q99958 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
FOXC2Q99958 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
FOXC2Q99958 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC20.05■□□□□ 0.8
FOXC2Q99958 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
FOXC2Q99958 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
FOXC2Q99958 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC20.05■□□□□ 0.8
FOXC2Q99958 MIR6821-201ENST00000617625 74 ntBASIC20.05■□□□□ 0.8
FOXC2Q99958 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
FOXC2Q99958 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
FOXC2Q99958 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
FOXC2Q99958 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
FOXC2Q99958 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
FOXC2Q99958 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
FOXC2Q99958 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
FOXC2Q99958 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.04■□□□□ 0.8
FOXC2Q99958 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
FOXC2Q99958 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.04■□□□□ 0.8
FOXC2Q99958 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
FOXC2Q99958 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
FOXC2Q99958 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
FOXC2Q99958 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC20.03■□□□□ 0.8
FOXC2Q99958 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC20.03■□□□□ 0.8
FOXC2Q99958 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
FOXC2Q99958 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC20.03■□□□□ 0.8
FOXC2Q99958 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC20.03■□□□□ 0.8
FOXC2Q99958 AC105265.2-201ENST00000467189 838 ntBASIC20.03■□□□□ 0.8
FOXC2Q99958 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.03■□□□□ 0.8
FOXC2Q99958 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC20.03■□□□□ 0.8
FOXC2Q99958 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms