Protein–RNA interactions for Protein: Q99884

SLC6A7, Sodium-dependent proline transporter, humanhuman

Predictions only

Length 636 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A7Q99884 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.49■□□□□ 0.87
SLC6A7Q99884 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
SLC6A7Q99884 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
SLC6A7Q99884 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SLC6A7Q99884 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
SLC6A7Q99884 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
SLC6A7Q99884 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SLC6A7Q99884 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SLC6A7Q99884 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SLC6A7Q99884 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SLC6A7Q99884 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SLC6A7Q99884 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SLC6A7Q99884 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SLC6A7Q99884 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC20.47■□□□□ 0.87
SLC6A7Q99884 AC126177.7-201ENST00000547904 679 ntBASIC20.47■□□□□ 0.87
SLC6A7Q99884 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SLC6A7Q99884 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
SLC6A7Q99884 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC20.47■□□□□ 0.87
SLC6A7Q99884 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC20.46■□□□□ 0.87
SLC6A7Q99884 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC20.46■□□□□ 0.87
SLC6A7Q99884 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC20.46■□□□□ 0.87
SLC6A7Q99884 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC20.46■□□□□ 0.87
SLC6A7Q99884 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC20.46■□□□□ 0.87
SLC6A7Q99884 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SLC6A7Q99884 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SLC6A7Q99884 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
SLC6A7Q99884 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
SLC6A7Q99884 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SLC6A7Q99884 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
SLC6A7Q99884 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SLC6A7Q99884 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SLC6A7Q99884 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
SLC6A7Q99884 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SLC6A7Q99884 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SLC6A7Q99884 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SLC6A7Q99884 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
SLC6A7Q99884 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SLC6A7Q99884 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SLC6A7Q99884 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC20.45■□□□□ 0.86
SLC6A7Q99884 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
SLC6A7Q99884 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SLC6A7Q99884 KRT18P60-201ENST00000312876 1297 ntBASIC20.44■□□□□ 0.86
SLC6A7Q99884 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SLC6A7Q99884 ECEL1P2-201ENST00000461596 1295 ntBASIC20.44■□□□□ 0.86
SLC6A7Q99884 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SLC6A7Q99884 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SLC6A7Q99884 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.43■□□□□ 0.86
SLC6A7Q99884 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC20.43■□□□□ 0.86
SLC6A7Q99884 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SLC6A7Q99884 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SLC6A7Q99884 TSPY13P-201ENST00000338964 914 ntBASIC20.43■□□□□ 0.86
SLC6A7Q99884 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC20.43■□□□□ 0.86
SLC6A7Q99884 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SLC6A7Q99884 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SLC6A7Q99884 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SLC6A7Q99884 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC20.42■□□□□ 0.86
SLC6A7Q99884 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC20.42■□□□□ 0.86
SLC6A7Q99884 MED25-210ENST00000612854 801 ntTSL 5 BASIC20.42■□□□□ 0.86
SLC6A7Q99884 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SLC6A7Q99884 MED25-214ENST00000622402 642 ntTSL 5 BASIC20.42■□□□□ 0.86
SLC6A7Q99884 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC20.42■□□□□ 0.86
SLC6A7Q99884 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SLC6A7Q99884 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SLC6A7Q99884 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.42■□□□□ 0.86
SLC6A7Q99884 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
SLC6A7Q99884 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC20.41■□□□□ 0.86
SLC6A7Q99884 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SLC6A7Q99884 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SLC6A7Q99884 AC004987.1-201ENST00000428627 508 ntBASIC20.41■□□□□ 0.86
SLC6A7Q99884 GFER-205ENST00000569451 517 ntTSL 5 BASIC20.41■□□□□ 0.86
SLC6A7Q99884 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC20.41■□□□□ 0.86
SLC6A7Q99884 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SLC6A7Q99884 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SLC6A7Q99884 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SLC6A7Q99884 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC20.41■□□□□ 0.86
SLC6A7Q99884 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SLC6A7Q99884 AC133561.1-201ENST00000568600 2415 ntBASIC20.41■□□□□ 0.86
SLC6A7Q99884 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SLC6A7Q99884 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC20.4■□□□□ 0.86
SLC6A7Q99884 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
SLC6A7Q99884 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
SLC6A7Q99884 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
SLC6A7Q99884 MOB2-207ENST00000614710 705 ntTSL 5 BASIC20.4■□□□□ 0.86
SLC6A7Q99884 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SLC6A7Q99884 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
SLC6A7Q99884 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SLC6A7Q99884 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC20.39■□□□□ 0.86
SLC6A7Q99884 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SLC6A7Q99884 ATP5G2P3-201ENST00000429083 425 ntBASIC20.39■□□□□ 0.85
SLC6A7Q99884 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SLC6A7Q99884 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SLC6A7Q99884 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.39■□□□□ 0.85
SLC6A7Q99884 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SLC6A7Q99884 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC20.38■□□□□ 0.85
SLC6A7Q99884 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC20.38■□□□□ 0.85
SLC6A7Q99884 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC20.38■□□□□ 0.85
SLC6A7Q99884 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
SLC6A7Q99884 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
SLC6A7Q99884 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC20.37■□□□□ 0.85
SLC6A7Q99884 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 10.7 ms