Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
GAFA1Q96PS6 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
GAFA1Q96PS6 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
GAFA1Q96PS6 GUK1-208ENST00000366728 842 ntTSL 2 BASIC19.81■□□□□ 0.76
GAFA1Q96PS6 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC19.81■□□□□ 0.76
GAFA1Q96PS6 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC19.81■□□□□ 0.76
GAFA1Q96PS6 HYI-210ENST00000486909 905 ntTSL 5 BASIC19.81■□□□□ 0.76
GAFA1Q96PS6 AC139795.1-202ENST00000500444 432 ntBASIC19.81■□□□□ 0.76
GAFA1Q96PS6 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC19.81■□□□□ 0.76
GAFA1Q96PS6 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
GAFA1Q96PS6 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
GAFA1Q96PS6 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
GAFA1Q96PS6 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
GAFA1Q96PS6 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
GAFA1Q96PS6 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
GAFA1Q96PS6 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
GAFA1Q96PS6 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
GAFA1Q96PS6 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
GAFA1Q96PS6 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC19.8■□□□□ 0.76
GAFA1Q96PS6 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
GAFA1Q96PS6 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC19.79■□□□□ 0.76
GAFA1Q96PS6 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
GAFA1Q96PS6 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
GAFA1Q96PS6 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
GAFA1Q96PS6 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
GAFA1Q96PS6 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
GAFA1Q96PS6 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
GAFA1Q96PS6 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC19.78■□□□□ 0.76
GAFA1Q96PS6 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
GAFA1Q96PS6 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
GAFA1Q96PS6 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC19.77■□□□□ 0.76
GAFA1Q96PS6 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
GAFA1Q96PS6 AC020928.2-201ENST00000588717 2197 ntBASIC19.77■□□□□ 0.76
GAFA1Q96PS6 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC19.77■□□□□ 0.76
GAFA1Q96PS6 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
GAFA1Q96PS6 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC19.77■□□□□ 0.76
GAFA1Q96PS6 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC19.77■□□□□ 0.76
GAFA1Q96PS6 BHLHE23-202ENST00000612929 1109 ntBASIC19.77■□□□□ 0.76
GAFA1Q96PS6 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
GAFA1Q96PS6 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
GAFA1Q96PS6 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
GAFA1Q96PS6 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
GAFA1Q96PS6 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
GAFA1Q96PS6 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
GAFA1Q96PS6 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
GAFA1Q96PS6 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
GAFA1Q96PS6 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC19.76■□□□□ 0.75
GAFA1Q96PS6 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
GAFA1Q96PS6 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
GAFA1Q96PS6 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC19.75■□□□□ 0.75
GAFA1Q96PS6 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
GAFA1Q96PS6 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
GAFA1Q96PS6 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
GAFA1Q96PS6 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
GAFA1Q96PS6 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
GAFA1Q96PS6 LONRF2P2-201ENST00000439212 571 ntBASIC19.75■□□□□ 0.75
GAFA1Q96PS6 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC19.75■□□□□ 0.75
GAFA1Q96PS6 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC19.75■□□□□ 0.75
GAFA1Q96PS6 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC19.75■□□□□ 0.75
GAFA1Q96PS6 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC19.75■□□□□ 0.75
GAFA1Q96PS6 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
GAFA1Q96PS6 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
GAFA1Q96PS6 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
GAFA1Q96PS6 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
GAFA1Q96PS6 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC19.74■□□□□ 0.75
GAFA1Q96PS6 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
GAFA1Q96PS6 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
GAFA1Q96PS6 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
GAFA1Q96PS6 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
GAFA1Q96PS6 SLC6A10P-202ENST00000431994 2058 ntBASIC19.74■□□□□ 0.75
GAFA1Q96PS6 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC19.74■□□□□ 0.75
GAFA1Q96PS6 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
GAFA1Q96PS6 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
GAFA1Q96PS6 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC19.73■□□□□ 0.75
GAFA1Q96PS6 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC19.73■□□□□ 0.75
GAFA1Q96PS6 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
GAFA1Q96PS6 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
GAFA1Q96PS6 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC19.73■□□□□ 0.75
GAFA1Q96PS6 FOXO3B-201ENST00000395675 1928 ntBASIC19.72■□□□□ 0.75
GAFA1Q96PS6 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC19.72■□□□□ 0.75
GAFA1Q96PS6 AC074183.2-201ENST00000623112 922 ntBASIC19.72■□□□□ 0.75
GAFA1Q96PS6 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
GAFA1Q96PS6 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
GAFA1Q96PS6 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
GAFA1Q96PS6 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
GAFA1Q96PS6 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
GAFA1Q96PS6 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
GAFA1Q96PS6 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
GAFA1Q96PS6 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
GAFA1Q96PS6 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
GAFA1Q96PS6 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
GAFA1Q96PS6 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
GAFA1Q96PS6 AC010980.1-201ENST00000587192 1142 ntBASIC19.71■□□□□ 0.75
GAFA1Q96PS6 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
GAFA1Q96PS6 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
GAFA1Q96PS6 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
GAFA1Q96PS6 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
GAFA1Q96PS6 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
GAFA1Q96PS6 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
GAFA1Q96PS6 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 13.3 ms