Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
COL21A1Q96P44 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
COL21A1Q96P44 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
COL21A1Q96P44 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
COL21A1Q96P44 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
COL21A1Q96P44 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
COL21A1Q96P44 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
COL21A1Q96P44 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
COL21A1Q96P44 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
COL21A1Q96P44 THRA-202ENST00000394121 2260 ntTSL 2 BASIC22.29■■□□□ 1.16
COL21A1Q96P44 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC22.29■■□□□ 1.16
COL21A1Q96P44 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC22.29■■□□□ 1.16
COL21A1Q96P44 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
COL21A1Q96P44 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC22.29■■□□□ 1.16
COL21A1Q96P44 NTF6A-201ENST00000591175 560 ntBASIC22.29■■□□□ 1.16
COL21A1Q96P44 MED17-227ENST00000640521 2047 ntTSL 5 BASIC22.29■■□□□ 1.16
COL21A1Q96P44 RARA-203ENST00000394086 2008 ntTSL 2 BASIC22.28■■□□□ 1.16
COL21A1Q96P44 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
COL21A1Q96P44 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
COL21A1Q96P44 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
COL21A1Q96P44 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
COL21A1Q96P44 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
COL21A1Q96P44 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
COL21A1Q96P44 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC22.27■■□□□ 1.16
COL21A1Q96P44 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
COL21A1Q96P44 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
COL21A1Q96P44 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
COL21A1Q96P44 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
COL21A1Q96P44 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
COL21A1Q96P44 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
COL21A1Q96P44 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC22.26■■□□□ 1.15
COL21A1Q96P44 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
COL21A1Q96P44 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
COL21A1Q96P44 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
COL21A1Q96P44 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
COL21A1Q96P44 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
COL21A1Q96P44 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
COL21A1Q96P44 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC22.25■■□□□ 1.15
COL21A1Q96P44 AL592293.1-201ENST00000502889 1188 ntBASIC22.25■■□□□ 1.15
COL21A1Q96P44 AC138932.3-201ENST00000567634 1902 ntBASIC22.25■■□□□ 1.15
COL21A1Q96P44 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
COL21A1Q96P44 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
COL21A1Q96P44 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
COL21A1Q96P44 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
COL21A1Q96P44 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
COL21A1Q96P44 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
COL21A1Q96P44 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC22.24■■□□□ 1.15
COL21A1Q96P44 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
COL21A1Q96P44 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
COL21A1Q96P44 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
COL21A1Q96P44 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
COL21A1Q96P44 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
COL21A1Q96P44 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC22.23■■□□□ 1.15
COL21A1Q96P44 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
COL21A1Q96P44 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
COL21A1Q96P44 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC22.23■■□□□ 1.15
COL21A1Q96P44 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
COL21A1Q96P44 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
COL21A1Q96P44 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
COL21A1Q96P44 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
COL21A1Q96P44 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
COL21A1Q96P44 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
COL21A1Q96P44 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
COL21A1Q96P44 KRT18P60-201ENST00000312876 1297 ntBASIC22.22■■□□□ 1.15
COL21A1Q96P44 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC22.22■■□□□ 1.15
COL21A1Q96P44 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
COL21A1Q96P44 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC22.22■■□□□ 1.15
COL21A1Q96P44 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC22.22■■□□□ 1.15
COL21A1Q96P44 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
COL21A1Q96P44 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
COL21A1Q96P44 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
COL21A1Q96P44 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
COL21A1Q96P44 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC22.21■■□□□ 1.15
COL21A1Q96P44 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
COL21A1Q96P44 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC22.21■■□□□ 1.15
COL21A1Q96P44 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC22.21■■□□□ 1.15
COL21A1Q96P44 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
COL21A1Q96P44 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
COL21A1Q96P44 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
COL21A1Q96P44 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC22.21■■□□□ 1.15
COL21A1Q96P44 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
COL21A1Q96P44 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
COL21A1Q96P44 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC22.2■■□□□ 1.15
COL21A1Q96P44 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC22.2■■□□□ 1.15
COL21A1Q96P44 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
COL21A1Q96P44 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
COL21A1Q96P44 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC22.2■■□□□ 1.14
COL21A1Q96P44 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
COL21A1Q96P44 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC22.2■■□□□ 1.14
COL21A1Q96P44 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
COL21A1Q96P44 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC22.2■■□□□ 1.14
COL21A1Q96P44 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
COL21A1Q96P44 AC097639.1-201ENST00000565519 1891 ntBASIC22.2■■□□□ 1.14
COL21A1Q96P44 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
COL21A1Q96P44 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
COL21A1Q96P44 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
COL21A1Q96P44 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
COL21A1Q96P44 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
COL21A1Q96P44 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
COL21A1Q96P44 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms