Protein–RNA interactions for Protein: Q96KK3

KCNS1, Potassium voltage-gated channel subfamily S member 1, humanhuman

Predictions only

Length 526 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNS1Q96KK3 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
KCNS1Q96KK3 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC17.9■□□□□ 0.46
KCNS1Q96KK3 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC17.9■□□□□ 0.46
KCNS1Q96KK3 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
KCNS1Q96KK3 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC17.9■□□□□ 0.46
KCNS1Q96KK3 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
KCNS1Q96KK3 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
KCNS1Q96KK3 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
KCNS1Q96KK3 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC17.89■□□□□ 0.46
KCNS1Q96KK3 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
KCNS1Q96KK3 DUSP8P5-201ENST00000422884 1815 ntBASIC17.89■□□□□ 0.45
KCNS1Q96KK3 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC17.89■□□□□ 0.45
KCNS1Q96KK3 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
KCNS1Q96KK3 DUX4L13-201ENST00000554103 1267 ntBASIC17.89■□□□□ 0.45
KCNS1Q96KK3 DUX4L15-201ENST00000611059 1267 ntBASIC17.89■□□□□ 0.45
KCNS1Q96KK3 DUX4L23-201ENST00000615195 1269 ntBASIC17.89■□□□□ 0.45
KCNS1Q96KK3 DUX4L24-201ENST00000617576 1269 ntBASIC17.89■□□□□ 0.45
KCNS1Q96KK3 DUX4L22-201ENST00000618238 1269 ntBASIC17.89■□□□□ 0.45
KCNS1Q96KK3 DUX4L20-201ENST00000619712 1269 ntBASIC17.89■□□□□ 0.45
KCNS1Q96KK3 DUX4L21-201ENST00000622058 1269 ntBASIC17.89■□□□□ 0.45
KCNS1Q96KK3 DUX4L10-201ENST00000622460 1267 ntBASIC17.89■□□□□ 0.45
KCNS1Q96KK3 DUX4L25-201ENST00000624915 1269 ntBASIC17.89■□□□□ 0.45
KCNS1Q96KK3 HGH1-207ENST00000628266 258 ntTSL 5 BASIC17.89■□□□□ 0.45
KCNS1Q96KK3 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
KCNS1Q96KK3 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
KCNS1Q96KK3 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC17.88■□□□□ 0.45
KCNS1Q96KK3 AC010501.1-201ENST00000606270 1962 ntBASIC17.88■□□□□ 0.45
KCNS1Q96KK3 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
KCNS1Q96KK3 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
KCNS1Q96KK3 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC17.88■□□□□ 0.45
KCNS1Q96KK3 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC17.88■□□□□ 0.45
KCNS1Q96KK3 CHST11-202ENST00000546689 756 ntTSL 2 BASIC17.88■□□□□ 0.45
KCNS1Q96KK3 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
KCNS1Q96KK3 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
KCNS1Q96KK3 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC17.88■□□□□ 0.45
KCNS1Q96KK3 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
KCNS1Q96KK3 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
KCNS1Q96KK3 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
KCNS1Q96KK3 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
KCNS1Q96KK3 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
KCNS1Q96KK3 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
KCNS1Q96KK3 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
KCNS1Q96KK3 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
KCNS1Q96KK3 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC17.87■□□□□ 0.45
KCNS1Q96KK3 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
KCNS1Q96KK3 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC17.87■□□□□ 0.45
KCNS1Q96KK3 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
KCNS1Q96KK3 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
KCNS1Q96KK3 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
KCNS1Q96KK3 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
KCNS1Q96KK3 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
KCNS1Q96KK3 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
KCNS1Q96KK3 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
KCNS1Q96KK3 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
KCNS1Q96KK3 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
KCNS1Q96KK3 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
KCNS1Q96KK3 AC148477.6-201ENST00000623746 465 ntBASIC17.85■□□□□ 0.45
KCNS1Q96KK3 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
KCNS1Q96KK3 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
KCNS1Q96KK3 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
KCNS1Q96KK3 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
KCNS1Q96KK3 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
KCNS1Q96KK3 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC17.84■□□□□ 0.45
KCNS1Q96KK3 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
KCNS1Q96KK3 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
KCNS1Q96KK3 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
KCNS1Q96KK3 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
KCNS1Q96KK3 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
KCNS1Q96KK3 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
KCNS1Q96KK3 LINC01124-201ENST00000409786 2117 ntBASIC17.84■□□□□ 0.45
KCNS1Q96KK3 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
KCNS1Q96KK3 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
KCNS1Q96KK3 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC17.83■□□□□ 0.45
KCNS1Q96KK3 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
KCNS1Q96KK3 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
KCNS1Q96KK3 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
KCNS1Q96KK3 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
KCNS1Q96KK3 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
KCNS1Q96KK3 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC17.83■□□□□ 0.44
KCNS1Q96KK3 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
KCNS1Q96KK3 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
KCNS1Q96KK3 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC17.83■□□□□ 0.44
KCNS1Q96KK3 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
KCNS1Q96KK3 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC17.83■□□□□ 0.44
KCNS1Q96KK3 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
KCNS1Q96KK3 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
KCNS1Q96KK3 MIR219A2-201ENST00000608502 1504 ntBASIC17.82■□□□□ 0.44
KCNS1Q96KK3 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
KCNS1Q96KK3 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
KCNS1Q96KK3 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
KCNS1Q96KK3 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
KCNS1Q96KK3 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC17.82■□□□□ 0.44
KCNS1Q96KK3 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
KCNS1Q96KK3 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
KCNS1Q96KK3 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
KCNS1Q96KK3 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
KCNS1Q96KK3 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
KCNS1Q96KK3 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC17.82■□□□□ 0.44
KCNS1Q96KK3 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
KCNS1Q96KK3 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms