Protein–RNA interactions for Protein: Q96AK3

APOBEC3D, DNA dC->dU-editing enzyme APOBEC-3D, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3DQ96AK3 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
APOBEC3DQ96AK3 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC20.53■□□□□ 0.88
APOBEC3DQ96AK3 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
APOBEC3DQ96AK3 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC20.53■□□□□ 0.88
APOBEC3DQ96AK3 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC20.53■□□□□ 0.88
APOBEC3DQ96AK3 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
APOBEC3DQ96AK3 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC20.53■□□□□ 0.88
APOBEC3DQ96AK3 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
APOBEC3DQ96AK3 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
APOBEC3DQ96AK3 IDNK-203ENST00000405990 629 ntTSL 2 BASIC20.52■□□□□ 0.88
APOBEC3DQ96AK3 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
APOBEC3DQ96AK3 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC20.52■□□□□ 0.88
APOBEC3DQ96AK3 RPS2P7-201ENST00000447334 885 ntBASIC20.52■□□□□ 0.88
APOBEC3DQ96AK3 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC20.52■□□□□ 0.88
APOBEC3DQ96AK3 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC20.52■□□□□ 0.87
APOBEC3DQ96AK3 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.87
APOBEC3DQ96AK3 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.87
APOBEC3DQ96AK3 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
APOBEC3DQ96AK3 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
APOBEC3DQ96AK3 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
APOBEC3DQ96AK3 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
APOBEC3DQ96AK3 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
APOBEC3DQ96AK3 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
APOBEC3DQ96AK3 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
APOBEC3DQ96AK3 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC20.5■□□□□ 0.87
APOBEC3DQ96AK3 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
APOBEC3DQ96AK3 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
APOBEC3DQ96AK3 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
APOBEC3DQ96AK3 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
APOBEC3DQ96AK3 AC022211.4-201ENST00000625094 2161 ntBASIC20.5■□□□□ 0.87
APOBEC3DQ96AK3 AC142381.3-201ENST00000568208 1670 ntBASIC20.5■□□□□ 0.87
APOBEC3DQ96AK3 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
APOBEC3DQ96AK3 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
APOBEC3DQ96AK3 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC20.5■□□□□ 0.87
APOBEC3DQ96AK3 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
APOBEC3DQ96AK3 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
APOBEC3DQ96AK3 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
APOBEC3DQ96AK3 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
APOBEC3DQ96AK3 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
APOBEC3DQ96AK3 SLC6A10P-202ENST00000431994 2058 ntBASIC20.49■□□□□ 0.87
APOBEC3DQ96AK3 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
APOBEC3DQ96AK3 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
APOBEC3DQ96AK3 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC20.49■□□□□ 0.87
APOBEC3DQ96AK3 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
APOBEC3DQ96AK3 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
APOBEC3DQ96AK3 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC20.48■□□□□ 0.87
APOBEC3DQ96AK3 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
APOBEC3DQ96AK3 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
APOBEC3DQ96AK3 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
APOBEC3DQ96AK3 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC20.47■□□□□ 0.87
APOBEC3DQ96AK3 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
APOBEC3DQ96AK3 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
APOBEC3DQ96AK3 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
APOBEC3DQ96AK3 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC20.47■□□□□ 0.87
APOBEC3DQ96AK3 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
APOBEC3DQ96AK3 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
APOBEC3DQ96AK3 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC20.47■□□□□ 0.87
APOBEC3DQ96AK3 AC087393.1-201ENST00000582896 145 ntBASIC20.47■□□□□ 0.87
APOBEC3DQ96AK3 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
APOBEC3DQ96AK3 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
APOBEC3DQ96AK3 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
APOBEC3DQ96AK3 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
APOBEC3DQ96AK3 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
APOBEC3DQ96AK3 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
APOBEC3DQ96AK3 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
APOBEC3DQ96AK3 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
APOBEC3DQ96AK3 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
APOBEC3DQ96AK3 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
APOBEC3DQ96AK3 HYI-210ENST00000486909 905 ntTSL 5 BASIC20.46■□□□□ 0.87
APOBEC3DQ96AK3 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC20.46■□□□□ 0.87
APOBEC3DQ96AK3 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
APOBEC3DQ96AK3 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC20.45■□□□□ 0.86
APOBEC3DQ96AK3 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
APOBEC3DQ96AK3 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
APOBEC3DQ96AK3 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
APOBEC3DQ96AK3 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
APOBEC3DQ96AK3 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
APOBEC3DQ96AK3 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC20.45■□□□□ 0.86
APOBEC3DQ96AK3 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC20.44■□□□□ 0.86
APOBEC3DQ96AK3 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
APOBEC3DQ96AK3 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC20.44■□□□□ 0.86
APOBEC3DQ96AK3 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
APOBEC3DQ96AK3 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
APOBEC3DQ96AK3 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
APOBEC3DQ96AK3 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
APOBEC3DQ96AK3 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
APOBEC3DQ96AK3 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
APOBEC3DQ96AK3 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
APOBEC3DQ96AK3 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
APOBEC3DQ96AK3 FOXO3B-201ENST00000395675 1928 ntBASIC20.43■□□□□ 0.86
APOBEC3DQ96AK3 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
APOBEC3DQ96AK3 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
APOBEC3DQ96AK3 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
APOBEC3DQ96AK3 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
APOBEC3DQ96AK3 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
APOBEC3DQ96AK3 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
APOBEC3DQ96AK3 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC20.42■□□□□ 0.86
APOBEC3DQ96AK3 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
APOBEC3DQ96AK3 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
APOBEC3DQ96AK3 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms