Protein–RNA interactions for Protein: Q92922

SMARCC1, SWI/SNF complex subunit SMARCC1, humanhuman

Predicted RBP Predictions only

Length 1,105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1Q92922 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
SMARCC1Q92922 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
SMARCC1Q92922 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
SMARCC1Q92922 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
SMARCC1Q92922 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
SMARCC1Q92922 AC133561.4-201ENST00000566112 224 ntBASIC30.86■■■□□ 2.53
SMARCC1Q92922 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC30.86■■■□□ 2.53
SMARCC1Q92922 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
SMARCC1Q92922 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC30.86■■■□□ 2.53
SMARCC1Q92922 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
SMARCC1Q92922 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC30.85■■■□□ 2.53
SMARCC1Q92922 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC30.85■■■□□ 2.53
SMARCC1Q92922 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC30.85■■■□□ 2.53
SMARCC1Q92922 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC30.85■■■□□ 2.53
SMARCC1Q92922 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC30.85■■■□□ 2.53
SMARCC1Q92922 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC30.84■■■□□ 2.53
SMARCC1Q92922 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC30.84■■■□□ 2.53
SMARCC1Q92922 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC30.84■■■□□ 2.53
SMARCC1Q92922 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC30.83■■■□□ 2.53
SMARCC1Q92922 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC30.83■■■□□ 2.53
SMARCC1Q92922 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC30.83■■■□□ 2.53
SMARCC1Q92922 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC30.82■■■□□ 2.52
SMARCC1Q92922 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC30.82■■■□□ 2.52
SMARCC1Q92922 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC30.82■■■□□ 2.52
SMARCC1Q92922 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
SMARCC1Q92922 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC30.82■■■□□ 2.52
SMARCC1Q92922 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC30.81■■■□□ 2.52
SMARCC1Q92922 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
SMARCC1Q92922 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC30.81■■■□□ 2.52
SMARCC1Q92922 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
SMARCC1Q92922 AL512631.2-201ENST00000604634 923 ntBASIC30.81■■■□□ 2.52
SMARCC1Q92922 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC30.81■■■□□ 2.52
SMARCC1Q92922 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
SMARCC1Q92922 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
SMARCC1Q92922 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC30.8■■■□□ 2.52
SMARCC1Q92922 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
SMARCC1Q92922 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC30.8■■■□□ 2.52
SMARCC1Q92922 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
SMARCC1Q92922 AK3-203ENST00000447596 705 ntTSL 2 BASIC30.79■■■□□ 2.52
SMARCC1Q92922 QDPR-206ENST00000508623 601 ntTSL 3 BASIC30.79■■■□□ 2.52
SMARCC1Q92922 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
SMARCC1Q92922 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC30.79■■■□□ 2.52
SMARCC1Q92922 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC30.79■■■□□ 2.52
SMARCC1Q92922 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
SMARCC1Q92922 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC30.78■■■□□ 2.52
SMARCC1Q92922 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
SMARCC1Q92922 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC30.77■■■□□ 2.52
SMARCC1Q92922 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC30.77■■■□□ 2.52
SMARCC1Q92922 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC30.77■■■□□ 2.52
SMARCC1Q92922 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC30.76■■■□□ 2.51
SMARCC1Q92922 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC30.76■■■□□ 2.51
SMARCC1Q92922 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC30.76■■■□□ 2.51
SMARCC1Q92922 CLTA-210ENST00000540080 989 ntTSL 2 BASIC30.76■■■□□ 2.51
SMARCC1Q92922 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC30.76■■■□□ 2.51
SMARCC1Q92922 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
SMARCC1Q92922 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC30.74■■■□□ 2.51
SMARCC1Q92922 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC30.74■■■□□ 2.51
SMARCC1Q92922 SSSCA1-AS1-201ENST00000567594 614 ntBASIC30.74■■■□□ 2.51
SMARCC1Q92922 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC30.74■■■□□ 2.51
SMARCC1Q92922 ST7-205ENST00000393446 2114 ntTSL 5 BASIC30.74■■■□□ 2.51
SMARCC1Q92922 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
SMARCC1Q92922 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC30.73■■■□□ 2.51
SMARCC1Q92922 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC30.73■■■□□ 2.51
SMARCC1Q92922 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC30.73■■■□□ 2.51
SMARCC1Q92922 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
SMARCC1Q92922 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC30.73■■■□□ 2.51
SMARCC1Q92922 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
SMARCC1Q92922 AP004609.3-201ENST00000610705 1884 ntBASIC30.72■■■□□ 2.51
SMARCC1Q92922 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
SMARCC1Q92922 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC30.72■■■□□ 2.51
SMARCC1Q92922 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC30.72■■■□□ 2.51
SMARCC1Q92922 SNAI3-AS1-204ENST00000567997 2048 ntBASIC30.71■■■□□ 2.51
SMARCC1Q92922 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC30.71■■■□□ 2.51
SMARCC1Q92922 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
SMARCC1Q92922 CD72-202ENST00000378430 585 ntTSL 3 BASIC30.71■■■□□ 2.51
SMARCC1Q92922 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC30.71■■■□□ 2.51
SMARCC1Q92922 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
SMARCC1Q92922 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC30.7■■■□□ 2.51
SMARCC1Q92922 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC30.7■■■□□ 2.5
SMARCC1Q92922 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC30.7■■■□□ 2.5
SMARCC1Q92922 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC30.69■■■□□ 2.5
SMARCC1Q92922 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
SMARCC1Q92922 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
SMARCC1Q92922 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
SMARCC1Q92922 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
SMARCC1Q92922 AF131216.4-201ENST00000638924 1588 ntBASIC30.69■■■□□ 2.5
SMARCC1Q92922 RASSF1-AS1-201ENST00000629828 790 ntBASIC30.68■■■□□ 2.5
SMARCC1Q92922 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC30.68■■■□□ 2.5
SMARCC1Q92922 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC30.68■■■□□ 2.5
SMARCC1Q92922 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC30.67■■■□□ 2.5
SMARCC1Q92922 EBPL-204ENST00000378272 766 ntTSL 3 BASIC30.67■■■□□ 2.5
SMARCC1Q92922 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
SMARCC1Q92922 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
SMARCC1Q92922 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
SMARCC1Q92922 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC30.66■■■□□ 2.5
SMARCC1Q92922 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC30.66■■■□□ 2.5
SMARCC1Q92922 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
SMARCC1Q92922 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC30.65■■■□□ 2.5
SMARCC1Q92922 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC30.65■■■□□ 2.5
SMARCC1Q92922 TFPT-201ENST00000391757 774 ntTSL 5 BASIC30.65■■■□□ 2.5
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms