Protein–RNA interactions for Protein: Q92738

USP6NL, USP6 N-terminal-like protein, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NLQ92738 MIR6724-4-201ENST00000617390 92 ntBASIC27.24■■□□□ 1.95
USP6NLQ92738 MIR6724-3-201ENST00000622482 92 ntBASIC27.24■■□□□ 1.95
USP6NLQ92738 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
USP6NLQ92738 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
USP6NLQ92738 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC27.22■■□□□ 1.95
USP6NLQ92738 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC27.22■■□□□ 1.95
USP6NLQ92738 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC27.22■■□□□ 1.95
USP6NLQ92738 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC27.22■■□□□ 1.95
USP6NLQ92738 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC27.22■■□□□ 1.95
USP6NLQ92738 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC27.21■■□□□ 1.95
USP6NLQ92738 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
USP6NLQ92738 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC27.21■■□□□ 1.95
USP6NLQ92738 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC27.21■■□□□ 1.95
USP6NLQ92738 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC27.21■■□□□ 1.95
USP6NLQ92738 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC27.21■■□□□ 1.95
USP6NLQ92738 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC27.21■■□□□ 1.95
USP6NLQ92738 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC27.21■■□□□ 1.95
USP6NLQ92738 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC27.21■■□□□ 1.95
USP6NLQ92738 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC27.21■■□□□ 1.95
USP6NLQ92738 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
USP6NLQ92738 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC27.2■■□□□ 1.95
USP6NLQ92738 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC27.2■■□□□ 1.95
USP6NLQ92738 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC27.2■■□□□ 1.94
USP6NLQ92738 MIR4466-201ENST00000606121 54 ntBASIC27.2■■□□□ 1.94
USP6NLQ92738 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC27.2■■□□□ 1.94
USP6NLQ92738 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC27.19■■□□□ 1.94
USP6NLQ92738 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC27.19■■□□□ 1.94
USP6NLQ92738 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
USP6NLQ92738 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC27.18■■□□□ 1.94
USP6NLQ92738 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
USP6NLQ92738 AC005837.3-201ENST00000612163 286 ntBASIC27.18■■□□□ 1.94
USP6NLQ92738 AC011551.1-201ENST00000614101 683 ntBASIC27.18■■□□□ 1.94
USP6NLQ92738 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC27.18■■□□□ 1.94
USP6NLQ92738 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC27.17■■□□□ 1.94
USP6NLQ92738 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
USP6NLQ92738 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC27.17■■□□□ 1.94
USP6NLQ92738 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
USP6NLQ92738 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC27.17■■□□□ 1.94
USP6NLQ92738 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC27.17■■□□□ 1.94
USP6NLQ92738 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC27.17■■□□□ 1.94
USP6NLQ92738 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC27.17■■□□□ 1.94
USP6NLQ92738 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC27.16■■□□□ 1.94
USP6NLQ92738 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC27.16■■□□□ 1.94
USP6NLQ92738 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC27.16■■□□□ 1.94
USP6NLQ92738 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC27.16■■□□□ 1.94
USP6NLQ92738 MTDHP2-201ENST00000601468 714 ntBASIC27.16■■□□□ 1.94
USP6NLQ92738 GAK-223ENST00000628912 497 ntTSL 5 BASIC27.16■■□□□ 1.94
USP6NLQ92738 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
USP6NLQ92738 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
USP6NLQ92738 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
USP6NLQ92738 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC27.16■■□□□ 1.94
USP6NLQ92738 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC27.16■■□□□ 1.94
USP6NLQ92738 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
USP6NLQ92738 AC139426.1-201ENST00000568218 2529 ntBASIC27.15■■□□□ 1.94
USP6NLQ92738 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
USP6NLQ92738 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC27.15■■□□□ 1.94
USP6NLQ92738 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC27.15■■□□□ 1.94
USP6NLQ92738 TK2-202ENST00000417693 1046 ntTSL 2 BASIC27.15■■□□□ 1.94
USP6NLQ92738 QDPR-206ENST00000508623 601 ntTSL 3 BASIC27.15■■□□□ 1.94
USP6NLQ92738 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC27.15■■□□□ 1.94
USP6NLQ92738 AL356740.2-201ENST00000601559 647 ntBASIC27.15■■□□□ 1.94
USP6NLQ92738 AL512631.2-201ENST00000604634 923 ntBASIC27.15■■□□□ 1.94
USP6NLQ92738 EXOG-217ENST00000630638 197 ntTSL 5 BASIC27.15■■□□□ 1.94
USP6NLQ92738 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC27.15■■□□□ 1.94
USP6NLQ92738 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC27.15■■□□□ 1.94
USP6NLQ92738 AC096631.2-201ENST00000436136 790 ntBASIC27.14■■□□□ 1.94
USP6NLQ92738 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
USP6NLQ92738 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
USP6NLQ92738 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
USP6NLQ92738 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC27.13■■□□□ 1.93
USP6NLQ92738 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC27.13■■□□□ 1.93
USP6NLQ92738 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
USP6NLQ92738 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
USP6NLQ92738 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC27.12■■□□□ 1.93
USP6NLQ92738 AC133561.4-201ENST00000566112 224 ntBASIC27.12■■□□□ 1.93
USP6NLQ92738 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
USP6NLQ92738 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
USP6NLQ92738 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC27.1■■□□□ 1.93
USP6NLQ92738 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC27.1■■□□□ 1.93
USP6NLQ92738 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC27.1■■□□□ 1.93
USP6NLQ92738 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
USP6NLQ92738 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC27.1■■□□□ 1.93
USP6NLQ92738 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC27.1■■□□□ 1.93
USP6NLQ92738 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC27.09■■□□□ 1.93
USP6NLQ92738 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
USP6NLQ92738 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC27.09■■□□□ 1.93
USP6NLQ92738 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC27.09■■□□□ 1.93
USP6NLQ92738 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
USP6NLQ92738 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC27.09■■□□□ 1.93
USP6NLQ92738 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC27.09■■□□□ 1.93
USP6NLQ92738 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
USP6NLQ92738 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
USP6NLQ92738 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
USP6NLQ92738 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC27.08■■□□□ 1.93
USP6NLQ92738 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
USP6NLQ92738 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC27.07■■□□□ 1.92
USP6NLQ92738 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
USP6NLQ92738 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC27.07■■□□□ 1.92
USP6NLQ92738 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC27.07■■□□□ 1.92
USP6NLQ92738 RASSF1-AS1-201ENST00000629828 790 ntBASIC27.07■■□□□ 1.92
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms