Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC20.73■□□□□ 0.91
RAB40AQ8WXH6 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC20.73■□□□□ 0.91
RAB40AQ8WXH6 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
RAB40AQ8WXH6 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RAB40AQ8WXH6 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC20.72■□□□□ 0.91
RAB40AQ8WXH6 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
RAB40AQ8WXH6 AC060814.1-201ENST00000554326 538 ntBASIC20.72■□□□□ 0.91
RAB40AQ8WXH6 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RAB40AQ8WXH6 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RAB40AQ8WXH6 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RAB40AQ8WXH6 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RAB40AQ8WXH6 LINC01124-201ENST00000409786 2117 ntBASIC20.72■□□□□ 0.91
RAB40AQ8WXH6 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RAB40AQ8WXH6 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC20.71■□□□□ 0.91
RAB40AQ8WXH6 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RAB40AQ8WXH6 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.71■□□□□ 0.91
RAB40AQ8WXH6 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC20.71■□□□□ 0.91
RAB40AQ8WXH6 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC20.71■□□□□ 0.91
RAB40AQ8WXH6 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC20.71■□□□□ 0.91
RAB40AQ8WXH6 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.71■□□□□ 0.91
RAB40AQ8WXH6 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
RAB40AQ8WXH6 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
RAB40AQ8WXH6 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC20.7■□□□□ 0.9
RAB40AQ8WXH6 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC20.7■□□□□ 0.9
RAB40AQ8WXH6 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RAB40AQ8WXH6 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RAB40AQ8WXH6 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RAB40AQ8WXH6 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.7■□□□□ 0.9
RAB40AQ8WXH6 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RAB40AQ8WXH6 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RAB40AQ8WXH6 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RAB40AQ8WXH6 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
RAB40AQ8WXH6 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC20.69■□□□□ 0.9
RAB40AQ8WXH6 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RAB40AQ8WXH6 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RAB40AQ8WXH6 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RAB40AQ8WXH6 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RAB40AQ8WXH6 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RAB40AQ8WXH6 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC20.68■□□□□ 0.9
RAB40AQ8WXH6 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC20.68■□□□□ 0.9
RAB40AQ8WXH6 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.68■□□□□ 0.9
RAB40AQ8WXH6 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RAB40AQ8WXH6 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
RAB40AQ8WXH6 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RAB40AQ8WXH6 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RAB40AQ8WXH6 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.68■□□□□ 0.9
RAB40AQ8WXH6 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RAB40AQ8WXH6 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
RAB40AQ8WXH6 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RAB40AQ8WXH6 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RAB40AQ8WXH6 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
RAB40AQ8WXH6 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC20.68■□□□□ 0.9
RAB40AQ8WXH6 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC20.68■□□□□ 0.9
RAB40AQ8WXH6 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
RAB40AQ8WXH6 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RAB40AQ8WXH6 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
RAB40AQ8WXH6 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RAB40AQ8WXH6 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.67■□□□□ 0.9
RAB40AQ8WXH6 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RAB40AQ8WXH6 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
RAB40AQ8WXH6 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
RAB40AQ8WXH6 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
RAB40AQ8WXH6 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RAB40AQ8WXH6 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
RAB40AQ8WXH6 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RAB40AQ8WXH6 AC097639.1-201ENST00000565519 1891 ntBASIC20.66■□□□□ 0.9
RAB40AQ8WXH6 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RAB40AQ8WXH6 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
RAB40AQ8WXH6 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RAB40AQ8WXH6 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RAB40AQ8WXH6 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RAB40AQ8WXH6 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
RAB40AQ8WXH6 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RAB40AQ8WXH6 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
RAB40AQ8WXH6 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RAB40AQ8WXH6 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
RAB40AQ8WXH6 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RAB40AQ8WXH6 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RAB40AQ8WXH6 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RAB40AQ8WXH6 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
RAB40AQ8WXH6 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
RAB40AQ8WXH6 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
RAB40AQ8WXH6 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
RAB40AQ8WXH6 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RAB40AQ8WXH6 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RAB40AQ8WXH6 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
RAB40AQ8WXH6 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
RAB40AQ8WXH6 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RAB40AQ8WXH6 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC20.64■□□□□ 0.89
RAB40AQ8WXH6 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC20.64■□□□□ 0.89
RAB40AQ8WXH6 ABHD17AP5-201ENST00000580133 923 ntBASIC20.64■□□□□ 0.89
RAB40AQ8WXH6 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC20.64■□□□□ 0.89
RAB40AQ8WXH6 MED25-210ENST00000612854 801 ntTSL 5 BASIC20.64■□□□□ 0.89
RAB40AQ8WXH6 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RAB40AQ8WXH6 MED25-214ENST00000622402 642 ntTSL 5 BASIC20.64■□□□□ 0.89
RAB40AQ8WXH6 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RAB40AQ8WXH6 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.64■□□□□ 0.89
RAB40AQ8WXH6 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RAB40AQ8WXH6 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
RAB40AQ8WXH6 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms