Protein–RNA interactions for Protein: Q8NEM2

SHCBP1, SHC SH2 domain-binding protein 1, humanhuman

Predictions only

Length 672 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1Q8NEM2 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
SHCBP1Q8NEM2 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
SHCBP1Q8NEM2 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
SHCBP1Q8NEM2 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC27.28■■□□□ 1.96
SHCBP1Q8NEM2 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC27.28■■□□□ 1.96
SHCBP1Q8NEM2 GAK-223ENST00000628912 497 ntTSL 5 BASIC27.28■■□□□ 1.96
SHCBP1Q8NEM2 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
SHCBP1Q8NEM2 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC27.27■■□□□ 1.96
SHCBP1Q8NEM2 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
SHCBP1Q8NEM2 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC27.27■■□□□ 1.96
SHCBP1Q8NEM2 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC27.27■■□□□ 1.96
SHCBP1Q8NEM2 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC27.27■■□□□ 1.96
SHCBP1Q8NEM2 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
SHCBP1Q8NEM2 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC27.26■■□□□ 1.95
SHCBP1Q8NEM2 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
SHCBP1Q8NEM2 RPP21-222ENST00000433076 577 ntTSL 2 BASIC27.26■■□□□ 1.95
SHCBP1Q8NEM2 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC27.26■■□□□ 1.95
SHCBP1Q8NEM2 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC27.26■■□□□ 1.95
SHCBP1Q8NEM2 AC010997.5-201ENST00000609182 354 ntBASIC27.26■■□□□ 1.95
SHCBP1Q8NEM2 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC27.25■■□□□ 1.95
SHCBP1Q8NEM2 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC27.25■■□□□ 1.95
SHCBP1Q8NEM2 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC27.25■■□□□ 1.95
SHCBP1Q8NEM2 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC27.25■■□□□ 1.95
SHCBP1Q8NEM2 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC27.25■■□□□ 1.95
SHCBP1Q8NEM2 AC131281.2-201ENST00000520478 145 ntBASIC27.25■■□□□ 1.95
SHCBP1Q8NEM2 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC27.25■■□□□ 1.95
SHCBP1Q8NEM2 AC142086.6-201ENST00000621154 1765 ntBASIC27.25■■□□□ 1.95
SHCBP1Q8NEM2 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC27.24■■□□□ 1.95
SHCBP1Q8NEM2 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC27.24■■□□□ 1.95
SHCBP1Q8NEM2 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC27.24■■□□□ 1.95
SHCBP1Q8NEM2 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
SHCBP1Q8NEM2 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
SHCBP1Q8NEM2 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
SHCBP1Q8NEM2 SENP5-202ENST00000419026 973 ntTSL 3 BASIC27.23■■□□□ 1.95
SHCBP1Q8NEM2 SSSCA1-AS1-201ENST00000567594 614 ntBASIC27.23■■□□□ 1.95
SHCBP1Q8NEM2 SRR-208ENST00000576848 588 ntTSL 4 BASIC27.23■■□□□ 1.95
SHCBP1Q8NEM2 TRIR-202ENST00000588213 841 ntTSL 3 BASIC27.23■■□□□ 1.95
SHCBP1Q8NEM2 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC27.22■■□□□ 1.95
SHCBP1Q8NEM2 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC27.22■■□□□ 1.95
SHCBP1Q8NEM2 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
SHCBP1Q8NEM2 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC27.22■■□□□ 1.95
SHCBP1Q8NEM2 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC27.22■■□□□ 1.95
SHCBP1Q8NEM2 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC27.22■■□□□ 1.95
SHCBP1Q8NEM2 MIR6724-1-201ENST00000616420 92 ntBASIC27.22■■□□□ 1.95
SHCBP1Q8NEM2 MIR6724-2-201ENST00000616483 92 ntBASIC27.22■■□□□ 1.95
SHCBP1Q8NEM2 MIR6724-4-201ENST00000617390 92 ntBASIC27.22■■□□□ 1.95
SHCBP1Q8NEM2 MIR6724-3-201ENST00000622482 92 ntBASIC27.22■■□□□ 1.95
SHCBP1Q8NEM2 AL117332.1-201ENST00000622628 974 ntBASIC27.22■■□□□ 1.95
SHCBP1Q8NEM2 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC27.22■■□□□ 1.95
SHCBP1Q8NEM2 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
SHCBP1Q8NEM2 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
SHCBP1Q8NEM2 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC27.21■■□□□ 1.95
SHCBP1Q8NEM2 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
SHCBP1Q8NEM2 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC27.21■■□□□ 1.95
SHCBP1Q8NEM2 MIR3621-201ENST00000580529 85 ntBASIC27.21■■□□□ 1.95
SHCBP1Q8NEM2 MTDHP2-201ENST00000601468 714 ntBASIC27.21■■□□□ 1.95
SHCBP1Q8NEM2 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC27.21■■□□□ 1.95
SHCBP1Q8NEM2 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
SHCBP1Q8NEM2 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC27.2■■□□□ 1.94
SHCBP1Q8NEM2 MIR638-201ENST00000385237 100 ntBASIC27.2■■□□□ 1.94
SHCBP1Q8NEM2 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
SHCBP1Q8NEM2 TK2-202ENST00000417693 1046 ntTSL 2 BASIC27.2■■□□□ 1.94
SHCBP1Q8NEM2 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
SHCBP1Q8NEM2 AL139246.5-201ENST00000606645 996 ntBASIC27.19■■□□□ 1.94
SHCBP1Q8NEM2 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC27.19■■□□□ 1.94
SHCBP1Q8NEM2 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC27.19■■□□□ 1.94
SHCBP1Q8NEM2 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC27.18■■□□□ 1.94
SHCBP1Q8NEM2 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC27.18■■□□□ 1.94
SHCBP1Q8NEM2 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC27.18■■□□□ 1.94
SHCBP1Q8NEM2 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC27.18■■□□□ 1.94
SHCBP1Q8NEM2 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
SHCBP1Q8NEM2 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC27.18■■□□□ 1.94
SHCBP1Q8NEM2 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
SHCBP1Q8NEM2 LSM4-201ENST00000252816 986 ntTSL 2 BASIC27.17■■□□□ 1.94
SHCBP1Q8NEM2 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC27.17■■□□□ 1.94
SHCBP1Q8NEM2 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC27.16■■□□□ 1.94
SHCBP1Q8NEM2 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC27.16■■□□□ 1.94
SHCBP1Q8NEM2 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
SHCBP1Q8NEM2 EXOG-217ENST00000630638 197 ntTSL 5 BASIC27.16■■□□□ 1.94
SHCBP1Q8NEM2 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC27.16■■□□□ 1.94
SHCBP1Q8NEM2 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC27.15■■□□□ 1.94
SHCBP1Q8NEM2 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
SHCBP1Q8NEM2 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC27.15■■□□□ 1.94
SHCBP1Q8NEM2 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
SHCBP1Q8NEM2 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
SHCBP1Q8NEM2 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC27.15■■□□□ 1.94
SHCBP1Q8NEM2 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC27.14■■□□□ 1.94
SHCBP1Q8NEM2 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
SHCBP1Q8NEM2 AL136116.3-201ENST00000402907 1138 ntBASIC27.14■■□□□ 1.94
SHCBP1Q8NEM2 NALT1-201ENST00000429224 738 ntTSL 5 BASIC27.14■■□□□ 1.94
SHCBP1Q8NEM2 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC27.14■■□□□ 1.94
SHCBP1Q8NEM2 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC27.14■■□□□ 1.94
SHCBP1Q8NEM2 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC27.14■■□□□ 1.93
SHCBP1Q8NEM2 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC27.14■■□□□ 1.93
SHCBP1Q8NEM2 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC27.13■■□□□ 1.93
SHCBP1Q8NEM2 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC27.13■■□□□ 1.93
SHCBP1Q8NEM2 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC27.13■■□□□ 1.93
SHCBP1Q8NEM2 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC27.13■■□□□ 1.93
SHCBP1Q8NEM2 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC27.13■■□□□ 1.93
SHCBP1Q8NEM2 MIR935-201ENST00000401179 91 ntBASIC27.13■■□□□ 1.93
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms