Protein–RNA interactions for Protein: Q8NDX5

PHC3, Polyhomeotic-like protein 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3Q8NDX5 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC23.59■■□□□ 1.37
PHC3Q8NDX5 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
PHC3Q8NDX5 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC23.58■■□□□ 1.37
PHC3Q8NDX5 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC23.58■■□□□ 1.37
PHC3Q8NDX5 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
PHC3Q8NDX5 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC23.58■■□□□ 1.37
PHC3Q8NDX5 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC23.58■■□□□ 1.37
PHC3Q8NDX5 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
PHC3Q8NDX5 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC23.58■■□□□ 1.36
PHC3Q8NDX5 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
PHC3Q8NDX5 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
PHC3Q8NDX5 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
PHC3Q8NDX5 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
PHC3Q8NDX5 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC23.57■■□□□ 1.36
PHC3Q8NDX5 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC23.57■■□□□ 1.36
PHC3Q8NDX5 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
PHC3Q8NDX5 AC012354.3-201ENST00000623734 483 ntBASIC23.57■■□□□ 1.36
PHC3Q8NDX5 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
PHC3Q8NDX5 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
PHC3Q8NDX5 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
PHC3Q8NDX5 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC23.57■■□□□ 1.36
PHC3Q8NDX5 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
PHC3Q8NDX5 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC23.56■■□□□ 1.36
PHC3Q8NDX5 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
PHC3Q8NDX5 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
PHC3Q8NDX5 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
PHC3Q8NDX5 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
PHC3Q8NDX5 AC004987.1-201ENST00000428627 508 ntBASIC23.56■■□□□ 1.36
PHC3Q8NDX5 DUX4L9-201ENST00000449051 1259 ntBASIC23.56■■□□□ 1.36
PHC3Q8NDX5 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC23.56■■□□□ 1.36
PHC3Q8NDX5 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
PHC3Q8NDX5 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
PHC3Q8NDX5 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
PHC3Q8NDX5 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
PHC3Q8NDX5 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
PHC3Q8NDX5 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC23.55■■□□□ 1.36
PHC3Q8NDX5 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
PHC3Q8NDX5 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
PHC3Q8NDX5 DUX4L18-201ENST00000553347 1267 ntBASIC23.55■■□□□ 1.36
PHC3Q8NDX5 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
PHC3Q8NDX5 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
PHC3Q8NDX5 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
PHC3Q8NDX5 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
PHC3Q8NDX5 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PHC3Q8NDX5 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC23.54■■□□□ 1.36
PHC3Q8NDX5 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PHC3Q8NDX5 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
PHC3Q8NDX5 AL033527.3-201ENST00000566366 1196 ntBASIC23.54■■□□□ 1.36
PHC3Q8NDX5 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
PHC3Q8NDX5 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
PHC3Q8NDX5 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC23.54■■□□□ 1.36
PHC3Q8NDX5 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
PHC3Q8NDX5 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
PHC3Q8NDX5 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC23.53■■□□□ 1.36
PHC3Q8NDX5 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
PHC3Q8NDX5 ATP5G2P3-201ENST00000429083 425 ntBASIC23.53■■□□□ 1.36
PHC3Q8NDX5 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC23.53■■□□□ 1.36
PHC3Q8NDX5 ERN1-208ENST00000606895 2068 ntBASIC23.53■■□□□ 1.36
PHC3Q8NDX5 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
PHC3Q8NDX5 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
PHC3Q8NDX5 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
PHC3Q8NDX5 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC23.52■■□□□ 1.36
PHC3Q8NDX5 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC23.52■■□□□ 1.36
PHC3Q8NDX5 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC23.52■■□□□ 1.36
PHC3Q8NDX5 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC23.52■■□□□ 1.36
PHC3Q8NDX5 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
PHC3Q8NDX5 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
PHC3Q8NDX5 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
PHC3Q8NDX5 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC23.51■■□□□ 1.35
PHC3Q8NDX5 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC23.51■■□□□ 1.35
PHC3Q8NDX5 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC23.51■■□□□ 1.35
PHC3Q8NDX5 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC23.51■■□□□ 1.35
PHC3Q8NDX5 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC23.5■■□□□ 1.35
PHC3Q8NDX5 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
PHC3Q8NDX5 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC23.5■■□□□ 1.35
PHC3Q8NDX5 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
PHC3Q8NDX5 AC018755.3-202ENST00000596210 929 ntBASIC23.5■■□□□ 1.35
PHC3Q8NDX5 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
PHC3Q8NDX5 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC23.49■■□□□ 1.35
PHC3Q8NDX5 AC092803.2-201ENST00000564287 1899 ntBASIC23.49■■□□□ 1.35
PHC3Q8NDX5 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
PHC3Q8NDX5 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
PHC3Q8NDX5 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
PHC3Q8NDX5 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
PHC3Q8NDX5 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
PHC3Q8NDX5 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
PHC3Q8NDX5 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
PHC3Q8NDX5 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC23.49■■□□□ 1.35
PHC3Q8NDX5 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
PHC3Q8NDX5 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC23.48■■□□□ 1.35
PHC3Q8NDX5 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
PHC3Q8NDX5 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
PHC3Q8NDX5 TSPY13P-201ENST00000338964 914 ntBASIC23.48■■□□□ 1.35
PHC3Q8NDX5 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
PHC3Q8NDX5 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC23.48■■□□□ 1.35
PHC3Q8NDX5 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC23.48■■□□□ 1.35
PHC3Q8NDX5 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC23.48■■□□□ 1.35
PHC3Q8NDX5 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
PHC3Q8NDX5 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
PHC3Q8NDX5 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms