Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 MIR4508-201ENST00000584178 70 ntBASIC24.23■■□□□ 1.47
PCDH20Q8N6Y1 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC24.23■■□□□ 1.47
PCDH20Q8N6Y1 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
PCDH20Q8N6Y1 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
PCDH20Q8N6Y1 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
PCDH20Q8N6Y1 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
PCDH20Q8N6Y1 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC24.22■■□□□ 1.47
PCDH20Q8N6Y1 KRT8P33-201ENST00000508125 1423 ntBASIC24.22■■□□□ 1.47
PCDH20Q8N6Y1 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC24.22■■□□□ 1.47
PCDH20Q8N6Y1 YBX1P4-201ENST00000392794 808 ntBASIC24.22■■□□□ 1.47
PCDH20Q8N6Y1 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
PCDH20Q8N6Y1 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC24.22■■□□□ 1.47
PCDH20Q8N6Y1 AC103834.1-201ENST00000520383 144 ntBASIC24.22■■□□□ 1.47
PCDH20Q8N6Y1 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
PCDH20Q8N6Y1 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
PCDH20Q8N6Y1 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC24.21■■□□□ 1.47
PCDH20Q8N6Y1 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
PCDH20Q8N6Y1 ERN1-208ENST00000606895 2068 ntBASIC24.2■■□□□ 1.47
PCDH20Q8N6Y1 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC24.2■■□□□ 1.46
PCDH20Q8N6Y1 AC092803.2-201ENST00000564287 1899 ntBASIC24.2■■□□□ 1.46
PCDH20Q8N6Y1 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC24.2■■□□□ 1.46
PCDH20Q8N6Y1 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
PCDH20Q8N6Y1 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC24.2■■□□□ 1.46
PCDH20Q8N6Y1 AC091060.1-201ENST00000623524 1766 ntBASIC24.2■■□□□ 1.46
PCDH20Q8N6Y1 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC24.2■■□□□ 1.46
PCDH20Q8N6Y1 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC24.2■■□□□ 1.46
PCDH20Q8N6Y1 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
PCDH20Q8N6Y1 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC24.19■■□□□ 1.46
PCDH20Q8N6Y1 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
PCDH20Q8N6Y1 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC24.19■■□□□ 1.46
PCDH20Q8N6Y1 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
PCDH20Q8N6Y1 AC010501.1-201ENST00000606270 1962 ntBASIC24.19■■□□□ 1.46
PCDH20Q8N6Y1 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC24.19■■□□□ 1.46
PCDH20Q8N6Y1 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
PCDH20Q8N6Y1 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC24.19■■□□□ 1.46
PCDH20Q8N6Y1 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
PCDH20Q8N6Y1 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC24.18■■□□□ 1.46
PCDH20Q8N6Y1 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC24.18■■□□□ 1.46
PCDH20Q8N6Y1 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
PCDH20Q8N6Y1 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
PCDH20Q8N6Y1 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC24.18■■□□□ 1.46
PCDH20Q8N6Y1 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
PCDH20Q8N6Y1 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC24.18■■□□□ 1.46
PCDH20Q8N6Y1 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC24.17■■□□□ 1.46
PCDH20Q8N6Y1 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC24.17■■□□□ 1.46
PCDH20Q8N6Y1 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
PCDH20Q8N6Y1 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC24.17■■□□□ 1.46
PCDH20Q8N6Y1 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
PCDH20Q8N6Y1 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC24.16■■□□□ 1.46
PCDH20Q8N6Y1 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC24.16■■□□□ 1.46
PCDH20Q8N6Y1 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC24.16■■□□□ 1.46
PCDH20Q8N6Y1 AC096887.2-201ENST00000623443 1957 ntBASIC24.16■■□□□ 1.46
PCDH20Q8N6Y1 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC24.15■■□□□ 1.46
PCDH20Q8N6Y1 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
PCDH20Q8N6Y1 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC24.15■■□□□ 1.46
PCDH20Q8N6Y1 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC24.15■■□□□ 1.46
PCDH20Q8N6Y1 AC022616.5-201ENST00000518796 181 ntBASIC24.15■■□□□ 1.46
PCDH20Q8N6Y1 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC24.15■■□□□ 1.46
PCDH20Q8N6Y1 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC24.15■■□□□ 1.46
PCDH20Q8N6Y1 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
PCDH20Q8N6Y1 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
PCDH20Q8N6Y1 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC24.14■■□□□ 1.45
PCDH20Q8N6Y1 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC24.14■■□□□ 1.45
PCDH20Q8N6Y1 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
PCDH20Q8N6Y1 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC24.13■■□□□ 1.45
PCDH20Q8N6Y1 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
PCDH20Q8N6Y1 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
PCDH20Q8N6Y1 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
PCDH20Q8N6Y1 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC24.13■■□□□ 1.45
PCDH20Q8N6Y1 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
PCDH20Q8N6Y1 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC24.13■■□□□ 1.45
PCDH20Q8N6Y1 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
PCDH20Q8N6Y1 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
PCDH20Q8N6Y1 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
PCDH20Q8N6Y1 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC24.12■■□□□ 1.45
PCDH20Q8N6Y1 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
PCDH20Q8N6Y1 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
PCDH20Q8N6Y1 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC24.11■■□□□ 1.45
PCDH20Q8N6Y1 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC24.11■■□□□ 1.45
PCDH20Q8N6Y1 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC24.11■■□□□ 1.45
PCDH20Q8N6Y1 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
PCDH20Q8N6Y1 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC24.11■■□□□ 1.45
PCDH20Q8N6Y1 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
PCDH20Q8N6Y1 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
PCDH20Q8N6Y1 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC24.1■■□□□ 1.45
PCDH20Q8N6Y1 AC103724.3-201ENST00000564481 992 ntBASIC24.1■■□□□ 1.45
PCDH20Q8N6Y1 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC24.1■■□□□ 1.45
PCDH20Q8N6Y1 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC24.1■■□□□ 1.45
PCDH20Q8N6Y1 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
PCDH20Q8N6Y1 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
PCDH20Q8N6Y1 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
PCDH20Q8N6Y1 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
PCDH20Q8N6Y1 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC24.09■■□□□ 1.45
PCDH20Q8N6Y1 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC24.09■■□□□ 1.45
PCDH20Q8N6Y1 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
PCDH20Q8N6Y1 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
PCDH20Q8N6Y1 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC24.08■■□□□ 1.45
PCDH20Q8N6Y1 AL592295.1-201ENST00000400984 884 ntBASIC24.08■■□□□ 1.45
PCDH20Q8N6Y1 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC24.08■■□□□ 1.45
PCDH20Q8N6Y1 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC24.08■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms