Protein–RNA interactions for Protein: Q8IYE0

CCDC146, Coiled-coil domain-containing protein 146, humanhuman

Predictions only

Length 955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC146Q8IYE0 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
CCDC146Q8IYE0 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC31.57■■■□□ 2.64
CCDC146Q8IYE0 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC31.57■■■□□ 2.64
CCDC146Q8IYE0 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC31.56■■■□□ 2.64
CCDC146Q8IYE0 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC31.56■■■□□ 2.64
CCDC146Q8IYE0 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC31.56■■■□□ 2.64
CCDC146Q8IYE0 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC31.56■■■□□ 2.64
CCDC146Q8IYE0 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC31.56■■■□□ 2.64
CCDC146Q8IYE0 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
CCDC146Q8IYE0 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC31.56■■■□□ 2.64
CCDC146Q8IYE0 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
CCDC146Q8IYE0 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
CCDC146Q8IYE0 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC31.55■■■□□ 2.64
CCDC146Q8IYE0 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
CCDC146Q8IYE0 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC31.55■■■□□ 2.64
CCDC146Q8IYE0 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC31.55■■■□□ 2.64
CCDC146Q8IYE0 AC010980.1-201ENST00000587192 1142 ntBASIC31.55■■■□□ 2.64
CCDC146Q8IYE0 PVT1_1.1-201ENST00000615125 194 ntBASIC31.55■■■□□ 2.64
CCDC146Q8IYE0 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
CCDC146Q8IYE0 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
CCDC146Q8IYE0 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
CCDC146Q8IYE0 BHLHE23-202ENST00000612929 1109 ntBASIC31.54■■■□□ 2.64
CCDC146Q8IYE0 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
CCDC146Q8IYE0 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC31.53■■■□□ 2.64
CCDC146Q8IYE0 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC31.53■■■□□ 2.64
CCDC146Q8IYE0 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
CCDC146Q8IYE0 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
CCDC146Q8IYE0 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC31.53■■■□□ 2.64
CCDC146Q8IYE0 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC31.53■■■□□ 2.64
CCDC146Q8IYE0 AC139795.1-202ENST00000500444 432 ntBASIC31.53■■■□□ 2.64
CCDC146Q8IYE0 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC31.53■■■□□ 2.64
CCDC146Q8IYE0 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC31.53■■■□□ 2.64
CCDC146Q8IYE0 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
CCDC146Q8IYE0 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
CCDC146Q8IYE0 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC31.52■■■□□ 2.64
CCDC146Q8IYE0 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
CCDC146Q8IYE0 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
CCDC146Q8IYE0 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.64
CCDC146Q8IYE0 BEX3-202ENST00000372634 753 ntTSL 2 BASIC31.51■■■□□ 2.63
CCDC146Q8IYE0 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC31.51■■■□□ 2.63
CCDC146Q8IYE0 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC31.51■■■□□ 2.63
CCDC146Q8IYE0 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
CCDC146Q8IYE0 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
CCDC146Q8IYE0 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC31.5■■■□□ 2.63
CCDC146Q8IYE0 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC31.5■■■□□ 2.63
CCDC146Q8IYE0 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
CCDC146Q8IYE0 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
CCDC146Q8IYE0 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC31.5■■■□□ 2.63
CCDC146Q8IYE0 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC31.5■■■□□ 2.63
CCDC146Q8IYE0 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
CCDC146Q8IYE0 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC31.5■■■□□ 2.63
CCDC146Q8IYE0 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC31.49■■■□□ 2.63
CCDC146Q8IYE0 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC31.49■■■□□ 2.63
CCDC146Q8IYE0 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
CCDC146Q8IYE0 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC31.49■■■□□ 2.63
CCDC146Q8IYE0 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
CCDC146Q8IYE0 SLC6A10P-202ENST00000431994 2058 ntBASIC31.48■■■□□ 2.63
CCDC146Q8IYE0 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
CCDC146Q8IYE0 LONRF2P2-201ENST00000439212 571 ntBASIC31.47■■■□□ 2.63
CCDC146Q8IYE0 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
CCDC146Q8IYE0 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
CCDC146Q8IYE0 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC31.47■■■□□ 2.63
CCDC146Q8IYE0 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
CCDC146Q8IYE0 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC31.46■■■□□ 2.63
CCDC146Q8IYE0 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC31.46■■■□□ 2.63
CCDC146Q8IYE0 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
CCDC146Q8IYE0 KRT18P10-201ENST00000388836 1287 ntBASIC31.46■■■□□ 2.63
CCDC146Q8IYE0 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC31.46■■■□□ 2.63
CCDC146Q8IYE0 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC31.46■■■□□ 2.63
CCDC146Q8IYE0 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
CCDC146Q8IYE0 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
CCDC146Q8IYE0 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC31.45■■■□□ 2.63
CCDC146Q8IYE0 HYI-210ENST00000486909 905 ntTSL 5 BASIC31.45■■■□□ 2.63
CCDC146Q8IYE0 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC31.45■■■□□ 2.63
CCDC146Q8IYE0 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC31.45■■■□□ 2.62
CCDC146Q8IYE0 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
CCDC146Q8IYE0 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
CCDC146Q8IYE0 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC31.44■■■□□ 2.62
CCDC146Q8IYE0 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
CCDC146Q8IYE0 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC31.44■■■□□ 2.62
CCDC146Q8IYE0 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC31.44■■■□□ 2.62
CCDC146Q8IYE0 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
CCDC146Q8IYE0 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
CCDC146Q8IYE0 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
CCDC146Q8IYE0 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC31.43■■■□□ 2.62
CCDC146Q8IYE0 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC31.43■■■□□ 2.62
CCDC146Q8IYE0 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
CCDC146Q8IYE0 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
CCDC146Q8IYE0 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
CCDC146Q8IYE0 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
CCDC146Q8IYE0 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC31.42■■■□□ 2.62
CCDC146Q8IYE0 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC31.41■■■□□ 2.62
CCDC146Q8IYE0 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC31.41■■■□□ 2.62
CCDC146Q8IYE0 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC31.41■■■□□ 2.62
CCDC146Q8IYE0 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC31.41■■■□□ 2.62
CCDC146Q8IYE0 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
CCDC146Q8IYE0 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
CCDC146Q8IYE0 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
CCDC146Q8IYE0 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
CCDC146Q8IYE0 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC31.41■■■□□ 2.62
Retrieved 100 of 98,524 protein–RNA pairs in 282 ms