Protein–RNA interactions for Protein: Q8IX18

DHX40, Probable ATP-dependent RNA helicase DHX40, humanhuman

Known RBP Predictions only

Length 779 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DHX40Q8IX18 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC26.47■■□□□ 1.83
DHX40Q8IX18 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC26.47■■□□□ 1.83
DHX40Q8IX18 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC26.46■■□□□ 1.83
DHX40Q8IX18 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
DHX40Q8IX18 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
DHX40Q8IX18 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC26.46■■□□□ 1.83
DHX40Q8IX18 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
DHX40Q8IX18 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC26.46■■□□□ 1.83
DHX40Q8IX18 CR559946.2-201ENST00000623684 991 ntBASIC26.46■■□□□ 1.83
DHX40Q8IX18 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC26.46■■□□□ 1.83
DHX40Q8IX18 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC26.46■■□□□ 1.83
DHX40Q8IX18 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC26.46■■□□□ 1.83
DHX40Q8IX18 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC26.45■■□□□ 1.83
DHX40Q8IX18 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC26.45■■□□□ 1.83
DHX40Q8IX18 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
DHX40Q8IX18 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC26.45■■□□□ 1.83
DHX40Q8IX18 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC26.45■■□□□ 1.83
DHX40Q8IX18 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC26.45■■□□□ 1.83
DHX40Q8IX18 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC26.45■■□□□ 1.82
DHX40Q8IX18 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
DHX40Q8IX18 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
DHX40Q8IX18 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC26.45■■□□□ 1.82
DHX40Q8IX18 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
DHX40Q8IX18 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
DHX40Q8IX18 AGPS-202ENST00000409888 815 ntTSL 4 BASIC26.44■■□□□ 1.82
DHX40Q8IX18 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC26.44■■□□□ 1.82
DHX40Q8IX18 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
DHX40Q8IX18 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
DHX40Q8IX18 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
DHX40Q8IX18 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC26.43■■□□□ 1.82
DHX40Q8IX18 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC26.43■■□□□ 1.82
DHX40Q8IX18 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC26.43■■□□□ 1.82
DHX40Q8IX18 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
DHX40Q8IX18 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
DHX40Q8IX18 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC26.42■■□□□ 1.82
DHX40Q8IX18 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
DHX40Q8IX18 MIR639-201ENST00000384974 98 ntBASIC26.42■■□□□ 1.82
DHX40Q8IX18 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
DHX40Q8IX18 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
DHX40Q8IX18 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC26.42■■□□□ 1.82
DHX40Q8IX18 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
DHX40Q8IX18 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC26.41■■□□□ 1.82
DHX40Q8IX18 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC26.41■■□□□ 1.82
DHX40Q8IX18 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC26.41■■□□□ 1.82
DHX40Q8IX18 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC26.41■■□□□ 1.82
DHX40Q8IX18 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
DHX40Q8IX18 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
DHX40Q8IX18 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC26.4■■□□□ 1.82
DHX40Q8IX18 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
DHX40Q8IX18 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC26.4■■□□□ 1.82
DHX40Q8IX18 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
DHX40Q8IX18 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
DHX40Q8IX18 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
DHX40Q8IX18 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
DHX40Q8IX18 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
DHX40Q8IX18 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
DHX40Q8IX18 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
DHX40Q8IX18 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
DHX40Q8IX18 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC26.38■■□□□ 1.81
DHX40Q8IX18 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC26.38■■□□□ 1.81
DHX40Q8IX18 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC26.38■■□□□ 1.81
DHX40Q8IX18 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC26.38■■□□□ 1.81
DHX40Q8IX18 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC26.37■■□□□ 1.81
DHX40Q8IX18 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
DHX40Q8IX18 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
DHX40Q8IX18 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
DHX40Q8IX18 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
DHX40Q8IX18 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
DHX40Q8IX18 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
DHX40Q8IX18 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC26.36■■□□□ 1.81
DHX40Q8IX18 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
DHX40Q8IX18 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
DHX40Q8IX18 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
DHX40Q8IX18 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
DHX40Q8IX18 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
DHX40Q8IX18 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
DHX40Q8IX18 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
DHX40Q8IX18 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
DHX40Q8IX18 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC26.35■■□□□ 1.81
DHX40Q8IX18 MIR4449-201ENST00000578365 66 ntBASIC26.35■■□□□ 1.81
DHX40Q8IX18 AC141586.4-201ENST00000624558 1573 ntBASIC26.35■■□□□ 1.81
DHX40Q8IX18 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC26.35■■□□□ 1.81
DHX40Q8IX18 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC26.35■■□□□ 1.81
DHX40Q8IX18 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC26.34■■□□□ 1.81
DHX40Q8IX18 AC004812.2-201ENST00000611079 2094 ntBASIC26.34■■□□□ 1.81
DHX40Q8IX18 AC068473.5-201ENST00000616428 2072 ntBASIC26.34■■□□□ 1.81
DHX40Q8IX18 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
DHX40Q8IX18 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC26.34■■□□□ 1.81
DHX40Q8IX18 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC26.34■■□□□ 1.81
DHX40Q8IX18 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
DHX40Q8IX18 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
DHX40Q8IX18 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC26.33■■□□□ 1.81
DHX40Q8IX18 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
DHX40Q8IX18 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
DHX40Q8IX18 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC26.33■■□□□ 1.81
DHX40Q8IX18 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
DHX40Q8IX18 AC012676.1-201ENST00000574705 1949 ntBASIC26.33■■□□□ 1.81
DHX40Q8IX18 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC26.33■■□□□ 1.81
DHX40Q8IX18 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
DHX40Q8IX18 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms