Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
LRRC28Q86X40 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
LRRC28Q86X40 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LRRC28Q86X40 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LRRC28Q86X40 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
LRRC28Q86X40 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LRRC28Q86X40 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LRRC28Q86X40 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.98■□□□□ 0.95
LRRC28Q86X40 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
LRRC28Q86X40 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
LRRC28Q86X40 BRD4-212ENST00000630599 726 ntTSL 2 BASIC20.98■□□□□ 0.95
LRRC28Q86X40 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LRRC28Q86X40 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC20.97■□□□□ 0.95
LRRC28Q86X40 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LRRC28Q86X40 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.97■□□□□ 0.95
LRRC28Q86X40 HES4-202ENST00000428771 1040 ntTSL 2 BASIC20.97■□□□□ 0.95
LRRC28Q86X40 AC126177.7-201ENST00000547904 679 ntBASIC20.97■□□□□ 0.95
LRRC28Q86X40 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
LRRC28Q86X40 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
LRRC28Q86X40 EED-207ENST00000528180 1745 ntTSL 5 BASIC20.97■□□□□ 0.95
LRRC28Q86X40 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LRRC28Q86X40 LINC01124-201ENST00000409786 2117 ntBASIC20.96■□□□□ 0.95
LRRC28Q86X40 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC20.96■□□□□ 0.95
LRRC28Q86X40 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LRRC28Q86X40 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
LRRC28Q86X40 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC20.96■□□□□ 0.95
LRRC28Q86X40 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
LRRC28Q86X40 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
LRRC28Q86X40 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.95
LRRC28Q86X40 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC20.95■□□□□ 0.94
LRRC28Q86X40 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
LRRC28Q86X40 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
LRRC28Q86X40 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
LRRC28Q86X40 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC20.95■□□□□ 0.94
LRRC28Q86X40 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC20.95■□□□□ 0.94
LRRC28Q86X40 AC060814.1-201ENST00000554326 538 ntBASIC20.95■□□□□ 0.94
LRRC28Q86X40 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC20.95■□□□□ 0.94
LRRC28Q86X40 RNF126P1-201ENST00000567452 1320 ntBASIC20.95■□□□□ 0.94
LRRC28Q86X40 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
LRRC28Q86X40 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LRRC28Q86X40 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
LRRC28Q86X40 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
LRRC28Q86X40 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.94■□□□□ 0.94
LRRC28Q86X40 AC079834.2-201ENST00000609776 1949 ntBASIC20.94■□□□□ 0.94
LRRC28Q86X40 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC20.94■□□□□ 0.94
LRRC28Q86X40 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.94■□□□□ 0.94
LRRC28Q86X40 LINC00543-201ENST00000567234 1845 ntBASIC20.94■□□□□ 0.94
LRRC28Q86X40 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
LRRC28Q86X40 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.93■□□□□ 0.94
LRRC28Q86X40 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
LRRC28Q86X40 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
LRRC28Q86X40 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
LRRC28Q86X40 AC097639.1-201ENST00000565519 1891 ntBASIC20.93■□□□□ 0.94
LRRC28Q86X40 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LRRC28Q86X40 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LRRC28Q86X40 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LRRC28Q86X40 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.93■□□□□ 0.94
LRRC28Q86X40 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LRRC28Q86X40 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
LRRC28Q86X40 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.93■□□□□ 0.94
LRRC28Q86X40 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LRRC28Q86X40 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
LRRC28Q86X40 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
LRRC28Q86X40 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC20.92■□□□□ 0.94
LRRC28Q86X40 MED25-210ENST00000612854 801 ntTSL 5 BASIC20.92■□□□□ 0.94
LRRC28Q86X40 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
LRRC28Q86X40 MED25-214ENST00000622402 642 ntTSL 5 BASIC20.92■□□□□ 0.94
LRRC28Q86X40 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
LRRC28Q86X40 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LRRC28Q86X40 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LRRC28Q86X40 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LRRC28Q86X40 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LRRC28Q86X40 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
LRRC28Q86X40 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
LRRC28Q86X40 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
LRRC28Q86X40 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.9■□□□□ 0.94
LRRC28Q86X40 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC20.9■□□□□ 0.94
LRRC28Q86X40 RARRES2P2-201ENST00000394842 485 ntBASIC20.9■□□□□ 0.94
LRRC28Q86X40 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
LRRC28Q86X40 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
LRRC28Q86X40 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
LRRC28Q86X40 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LRRC28Q86X40 AC096887.2-201ENST00000623443 1957 ntBASIC20.9■□□□□ 0.94
LRRC28Q86X40 AP003733.4-201ENST00000623785 1697 ntBASIC20.89■□□□□ 0.94
LRRC28Q86X40 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
LRRC28Q86X40 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LRRC28Q86X40 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
LRRC28Q86X40 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.93
LRRC28Q86X40 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
LRRC28Q86X40 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LRRC28Q86X40 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LRRC28Q86X40 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
LRRC28Q86X40 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
LRRC28Q86X40 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
LRRC28Q86X40 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC20.88■□□□□ 0.93
LRRC28Q86X40 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
LRRC28Q86X40 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
LRRC28Q86X40 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
LRRC28Q86X40 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LRRC28Q86X40 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms