Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
LYSMD3Q7Z3D4 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
LYSMD3Q7Z3D4 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC23.86■■□□□ 1.41
LYSMD3Q7Z3D4 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
LYSMD3Q7Z3D4 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC23.86■■□□□ 1.41
LYSMD3Q7Z3D4 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
LYSMD3Q7Z3D4 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC23.86■■□□□ 1.41
LYSMD3Q7Z3D4 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
LYSMD3Q7Z3D4 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
LYSMD3Q7Z3D4 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC23.85■■□□□ 1.41
LYSMD3Q7Z3D4 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
LYSMD3Q7Z3D4 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC23.84■■□□□ 1.41
LYSMD3Q7Z3D4 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
LYSMD3Q7Z3D4 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
LYSMD3Q7Z3D4 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
LYSMD3Q7Z3D4 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC23.84■■□□□ 1.41
LYSMD3Q7Z3D4 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
LYSMD3Q7Z3D4 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
LYSMD3Q7Z3D4 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
LYSMD3Q7Z3D4 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
LYSMD3Q7Z3D4 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
LYSMD3Q7Z3D4 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC23.83■■□□□ 1.41
LYSMD3Q7Z3D4 HYI-210ENST00000486909 905 ntTSL 5 BASIC23.83■■□□□ 1.41
LYSMD3Q7Z3D4 AC139795.1-202ENST00000500444 432 ntBASIC23.83■■□□□ 1.41
LYSMD3Q7Z3D4 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
LYSMD3Q7Z3D4 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
LYSMD3Q7Z3D4 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
LYSMD3Q7Z3D4 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
LYSMD3Q7Z3D4 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
LYSMD3Q7Z3D4 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
LYSMD3Q7Z3D4 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
LYSMD3Q7Z3D4 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
LYSMD3Q7Z3D4 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC23.82■■□□□ 1.4
LYSMD3Q7Z3D4 BHLHE23-202ENST00000612929 1109 ntBASIC23.82■■□□□ 1.4
LYSMD3Q7Z3D4 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
LYSMD3Q7Z3D4 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
LYSMD3Q7Z3D4 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
LYSMD3Q7Z3D4 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
LYSMD3Q7Z3D4 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC23.81■■□□□ 1.4
LYSMD3Q7Z3D4 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
LYSMD3Q7Z3D4 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC23.81■■□□□ 1.4
LYSMD3Q7Z3D4 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC23.81■■□□□ 1.4
LYSMD3Q7Z3D4 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC23.81■■□□□ 1.4
LYSMD3Q7Z3D4 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
LYSMD3Q7Z3D4 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
LYSMD3Q7Z3D4 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
LYSMD3Q7Z3D4 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
LYSMD3Q7Z3D4 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
LYSMD3Q7Z3D4 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
LYSMD3Q7Z3D4 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC23.8■■□□□ 1.4
LYSMD3Q7Z3D4 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
LYSMD3Q7Z3D4 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC23.8■■□□□ 1.4
LYSMD3Q7Z3D4 CEBPA-AS1-201ENST00000592982 2198 ntBASIC23.8■■□□□ 1.4
LYSMD3Q7Z3D4 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
LYSMD3Q7Z3D4 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
LYSMD3Q7Z3D4 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
LYSMD3Q7Z3D4 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
LYSMD3Q7Z3D4 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
LYSMD3Q7Z3D4 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
LYSMD3Q7Z3D4 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
LYSMD3Q7Z3D4 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
LYSMD3Q7Z3D4 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC23.79■■□□□ 1.4
LYSMD3Q7Z3D4 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
LYSMD3Q7Z3D4 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
LYSMD3Q7Z3D4 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
LYSMD3Q7Z3D4 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
LYSMD3Q7Z3D4 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
LYSMD3Q7Z3D4 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
LYSMD3Q7Z3D4 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
LYSMD3Q7Z3D4 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
LYSMD3Q7Z3D4 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC23.78■■□□□ 1.4
LYSMD3Q7Z3D4 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
LYSMD3Q7Z3D4 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
LYSMD3Q7Z3D4 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
LYSMD3Q7Z3D4 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
LYSMD3Q7Z3D4 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
LYSMD3Q7Z3D4 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
LYSMD3Q7Z3D4 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC23.77■■□□□ 1.4
LYSMD3Q7Z3D4 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC23.77■■□□□ 1.4
LYSMD3Q7Z3D4 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
LYSMD3Q7Z3D4 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC23.77■■□□□ 1.4
LYSMD3Q7Z3D4 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
LYSMD3Q7Z3D4 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
LYSMD3Q7Z3D4 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC23.76■■□□□ 1.39
LYSMD3Q7Z3D4 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
LYSMD3Q7Z3D4 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
LYSMD3Q7Z3D4 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
LYSMD3Q7Z3D4 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC23.76■■□□□ 1.39
LYSMD3Q7Z3D4 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
LYSMD3Q7Z3D4 LONRF2P2-201ENST00000439212 571 ntBASIC23.76■■□□□ 1.39
LYSMD3Q7Z3D4 AC010980.1-201ENST00000587192 1142 ntBASIC23.76■■□□□ 1.39
LYSMD3Q7Z3D4 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC23.76■■□□□ 1.39
LYSMD3Q7Z3D4 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
LYSMD3Q7Z3D4 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
LYSMD3Q7Z3D4 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
LYSMD3Q7Z3D4 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
LYSMD3Q7Z3D4 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
LYSMD3Q7Z3D4 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC23.75■■□□□ 1.39
LYSMD3Q7Z3D4 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
LYSMD3Q7Z3D4 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC23.74■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms