Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC20.12■□□□□ 0.81
VPS13CQ709C8 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC20.12■□□□□ 0.81
VPS13CQ709C8 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC20.12■□□□□ 0.81
VPS13CQ709C8 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
VPS13CQ709C8 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
VPS13CQ709C8 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
VPS13CQ709C8 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
VPS13CQ709C8 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
VPS13CQ709C8 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC20.11■□□□□ 0.81
VPS13CQ709C8 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
VPS13CQ709C8 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
VPS13CQ709C8 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
VPS13CQ709C8 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.1■□□□□ 0.81
VPS13CQ709C8 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
VPS13CQ709C8 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
VPS13CQ709C8 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
VPS13CQ709C8 PROC-203ENST00000409048 1586 ntTSL 5 BASIC20.09■□□□□ 0.81
VPS13CQ709C8 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
VPS13CQ709C8 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
VPS13CQ709C8 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.09■□□□□ 0.81
VPS13CQ709C8 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
VPS13CQ709C8 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC20.09■□□□□ 0.81
VPS13CQ709C8 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
VPS13CQ709C8 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
VPS13CQ709C8 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.08■□□□□ 0.8
VPS13CQ709C8 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
VPS13CQ709C8 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC20.08■□□□□ 0.8
VPS13CQ709C8 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
VPS13CQ709C8 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
VPS13CQ709C8 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.08■□□□□ 0.8
VPS13CQ709C8 MIR4281-201ENST00000580852 62 ntBASIC20.08■□□□□ 0.8
VPS13CQ709C8 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
VPS13CQ709C8 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
VPS13CQ709C8 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.07■□□□□ 0.8
VPS13CQ709C8 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.07■□□□□ 0.8
VPS13CQ709C8 MIR6724-1-201ENST00000616420 92 ntBASIC20.07■□□□□ 0.8
VPS13CQ709C8 MIR6724-2-201ENST00000616483 92 ntBASIC20.07■□□□□ 0.8
VPS13CQ709C8 MIR6724-4-201ENST00000617390 92 ntBASIC20.07■□□□□ 0.8
VPS13CQ709C8 MIR6724-3-201ENST00000622482 92 ntBASIC20.07■□□□□ 0.8
VPS13CQ709C8 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC20.07■□□□□ 0.8
VPS13CQ709C8 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
VPS13CQ709C8 AF131216.4-201ENST00000638924 1588 ntBASIC20.07■□□□□ 0.8
VPS13CQ709C8 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
VPS13CQ709C8 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
VPS13CQ709C8 AC104564.3-201ENST00000582367 638 ntBASIC20.07■□□□□ 0.8
VPS13CQ709C8 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
VPS13CQ709C8 MIR5787-201ENST00000611784 55 ntBASIC20.07■□□□□ 0.8
VPS13CQ709C8 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
VPS13CQ709C8 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC20.06■□□□□ 0.8
VPS13CQ709C8 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
VPS13CQ709C8 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
VPS13CQ709C8 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
VPS13CQ709C8 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
VPS13CQ709C8 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
VPS13CQ709C8 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.05■□□□□ 0.8
VPS13CQ709C8 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
VPS13CQ709C8 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.05■□□□□ 0.8
VPS13CQ709C8 ST7-202ENST00000323984 2142 ntTSL 5 BASIC20.05■□□□□ 0.8
VPS13CQ709C8 ST7-207ENST00000393449 2127 ntTSL 5 BASIC20.05■□□□□ 0.8
VPS13CQ709C8 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
VPS13CQ709C8 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
VPS13CQ709C8 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.05■□□□□ 0.8
VPS13CQ709C8 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
VPS13CQ709C8 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
VPS13CQ709C8 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
VPS13CQ709C8 AC010997.5-201ENST00000609182 354 ntBASIC20.04■□□□□ 0.8
VPS13CQ709C8 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.04■□□□□ 0.8
VPS13CQ709C8 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
VPS13CQ709C8 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC20.04■□□□□ 0.8
VPS13CQ709C8 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
VPS13CQ709C8 LGR4-203ENST00000480977 492 ntTSL 2 BASIC20.04■□□□□ 0.8
VPS13CQ709C8 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
VPS13CQ709C8 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
VPS13CQ709C8 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
VPS13CQ709C8 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.03■□□□□ 0.8
VPS13CQ709C8 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
VPS13CQ709C8 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
VPS13CQ709C8 MIR6821-201ENST00000617625 74 ntBASIC20.03■□□□□ 0.8
VPS13CQ709C8 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
VPS13CQ709C8 AL355001.2-201ENST00000620617 1191 ntBASIC20.02■□□□□ 0.8
VPS13CQ709C8 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
VPS13CQ709C8 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
VPS13CQ709C8 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
VPS13CQ709C8 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
VPS13CQ709C8 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.79
VPS13CQ709C8 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
VPS13CQ709C8 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
VPS13CQ709C8 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC20.01■□□□□ 0.79
VPS13CQ709C8 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
VPS13CQ709C8 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
VPS13CQ709C8 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
VPS13CQ709C8 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
VPS13CQ709C8 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20■□□□□ 0.79
VPS13CQ709C8 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
VPS13CQ709C8 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20■□□□□ 0.79
VPS13CQ709C8 AC011551.1-201ENST00000614101 683 ntBASIC20■□□□□ 0.79
VPS13CQ709C8 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20■□□□□ 0.79
VPS13CQ709C8 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20■□□□□ 0.79
VPS13CQ709C8 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
VPS13CQ709C8 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 11 ms