Protein–RNA interactions for Protein: Q6PEY1

TMEM88, Transmembrane protein 88, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88Q6PEY1 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TMEM88Q6PEY1 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TMEM88Q6PEY1 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
TMEM88Q6PEY1 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC18.98■□□□□ 0.63
TMEM88Q6PEY1 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
TMEM88Q6PEY1 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
TMEM88Q6PEY1 DENR-202ENST00000455982 1052 ntTSL 5 BASIC18.97■□□□□ 0.63
TMEM88Q6PEY1 CHML-205ENST00000638160 705 ntTSL 3 BASIC18.97■□□□□ 0.63
TMEM88Q6PEY1 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC18.97■□□□□ 0.63
TMEM88Q6PEY1 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TMEM88Q6PEY1 AL121603.2-201ENST00000557373 2117 ntBASIC18.97■□□□□ 0.63
TMEM88Q6PEY1 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TMEM88Q6PEY1 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TMEM88Q6PEY1 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TMEM88Q6PEY1 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
TMEM88Q6PEY1 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC18.96■□□□□ 0.63
TMEM88Q6PEY1 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC18.96■□□□□ 0.63
TMEM88Q6PEY1 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
TMEM88Q6PEY1 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TMEM88Q6PEY1 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TMEM88Q6PEY1 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TMEM88Q6PEY1 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TMEM88Q6PEY1 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TMEM88Q6PEY1 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TMEM88Q6PEY1 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TMEM88Q6PEY1 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC18.95■□□□□ 0.62
TMEM88Q6PEY1 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC18.95■□□□□ 0.62
TMEM88Q6PEY1 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TMEM88Q6PEY1 NRG1-221ENST00000614767 762 ntTSL 5 BASIC18.95■□□□□ 0.62
TMEM88Q6PEY1 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TMEM88Q6PEY1 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC18.94■□□□□ 0.62
TMEM88Q6PEY1 ABCB10P4-201ENST00000566803 2184 ntBASIC18.94■□□□□ 0.62
TMEM88Q6PEY1 MIR3665-201ENST00000578708 105 ntBASIC18.94■□□□□ 0.62
TMEM88Q6PEY1 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC18.94■□□□□ 0.62
TMEM88Q6PEY1 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TMEM88Q6PEY1 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TMEM88Q6PEY1 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TMEM88Q6PEY1 AC096887.2-201ENST00000623443 1957 ntBASIC18.93■□□□□ 0.62
TMEM88Q6PEY1 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TMEM88Q6PEY1 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC18.93■□□□□ 0.62
TMEM88Q6PEY1 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TMEM88Q6PEY1 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TMEM88Q6PEY1 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC18.93■□□□□ 0.62
TMEM88Q6PEY1 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
TMEM88Q6PEY1 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TMEM88Q6PEY1 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TMEM88Q6PEY1 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TMEM88Q6PEY1 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TMEM88Q6PEY1 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
TMEM88Q6PEY1 AC007375.3-201ENST00000600936 2314 ntBASIC18.92■□□□□ 0.62
TMEM88Q6PEY1 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TMEM88Q6PEY1 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
TMEM88Q6PEY1 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC18.92■□□□□ 0.62
TMEM88Q6PEY1 AC005559.1-201ENST00000589661 871 ntBASIC18.92■□□□□ 0.62
TMEM88Q6PEY1 GALC-202ENST00000393568 2054 ntTSL 2 BASIC18.92■□□□□ 0.62
TMEM88Q6PEY1 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
TMEM88Q6PEY1 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC18.92■□□□□ 0.62
TMEM88Q6PEY1 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TMEM88Q6PEY1 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TMEM88Q6PEY1 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TMEM88Q6PEY1 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TMEM88Q6PEY1 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TMEM88Q6PEY1 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC18.91■□□□□ 0.62
TMEM88Q6PEY1 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TMEM88Q6PEY1 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC18.91■□□□□ 0.62
TMEM88Q6PEY1 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TMEM88Q6PEY1 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TMEM88Q6PEY1 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TMEM88Q6PEY1 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TMEM88Q6PEY1 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TMEM88Q6PEY1 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TMEM88Q6PEY1 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TMEM88Q6PEY1 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TMEM88Q6PEY1 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TMEM88Q6PEY1 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TMEM88Q6PEY1 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TMEM88Q6PEY1 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC18.9■□□□□ 0.62
TMEM88Q6PEY1 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TMEM88Q6PEY1 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC18.9■□□□□ 0.62
TMEM88Q6PEY1 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TMEM88Q6PEY1 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
TMEM88Q6PEY1 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
TMEM88Q6PEY1 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TMEM88Q6PEY1 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC18.89■□□□□ 0.61
TMEM88Q6PEY1 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TMEM88Q6PEY1 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
TMEM88Q6PEY1 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
TMEM88Q6PEY1 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
TMEM88Q6PEY1 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
TMEM88Q6PEY1 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TMEM88Q6PEY1 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TMEM88Q6PEY1 DUX4L28-201ENST00000623687 678 ntBASIC18.89■□□□□ 0.61
TMEM88Q6PEY1 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TMEM88Q6PEY1 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC18.89■□□□□ 0.61
TMEM88Q6PEY1 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TMEM88Q6PEY1 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC18.88■□□□□ 0.61
TMEM88Q6PEY1 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC18.88■□□□□ 0.61
TMEM88Q6PEY1 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC18.88■□□□□ 0.61
TMEM88Q6PEY1 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TMEM88Q6PEY1 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms