Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
NIPAL3Q6P499 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NIPAL3Q6P499 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
NIPAL3Q6P499 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC21.52■■□□□ 1.04
NIPAL3Q6P499 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC21.52■■□□□ 1.04
NIPAL3Q6P499 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC21.52■■□□□ 1.04
NIPAL3Q6P499 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC21.52■■□□□ 1.04
NIPAL3Q6P499 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
NIPAL3Q6P499 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NIPAL3Q6P499 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NIPAL3Q6P499 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
NIPAL3Q6P499 GFER-205ENST00000569451 517 ntTSL 5 BASIC21.51■■□□□ 1.03
NIPAL3Q6P499 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC21.51■■□□□ 1.03
NIPAL3Q6P499 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NIPAL3Q6P499 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC21.5■■□□□ 1.03
NIPAL3Q6P499 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
NIPAL3Q6P499 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
NIPAL3Q6P499 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC21.5■■□□□ 1.03
NIPAL3Q6P499 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC21.5■■□□□ 1.03
NIPAL3Q6P499 HYI-213ENST00000583037 1322 ntTSL 5 BASIC21.5■■□□□ 1.03
NIPAL3Q6P499 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
NIPAL3Q6P499 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
NIPAL3Q6P499 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
NIPAL3Q6P499 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
NIPAL3Q6P499 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
NIPAL3Q6P499 AC026202.3-201ENST00000600805 1127 ntBASIC21.49■■□□□ 1.03
NIPAL3Q6P499 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC21.49■■□□□ 1.03
NIPAL3Q6P499 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
NIPAL3Q6P499 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
NIPAL3Q6P499 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
NIPAL3Q6P499 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
NIPAL3Q6P499 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
NIPAL3Q6P499 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC21.48■■□□□ 1.03
NIPAL3Q6P499 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
NIPAL3Q6P499 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
NIPAL3Q6P499 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
NIPAL3Q6P499 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC21.48■■□□□ 1.03
NIPAL3Q6P499 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
NIPAL3Q6P499 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
NIPAL3Q6P499 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
NIPAL3Q6P499 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC21.47■■□□□ 1.03
NIPAL3Q6P499 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
NIPAL3Q6P499 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
NIPAL3Q6P499 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC21.47■■□□□ 1.03
NIPAL3Q6P499 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC21.47■■□□□ 1.03
NIPAL3Q6P499 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
NIPAL3Q6P499 AC133552.2-201ENST00000619106 1032 ntBASIC21.47■■□□□ 1.03
NIPAL3Q6P499 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
NIPAL3Q6P499 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
NIPAL3Q6P499 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
NIPAL3Q6P499 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
NIPAL3Q6P499 AC009831.1-201ENST00000580420 1582 ntBASIC21.46■■□□□ 1.03
NIPAL3Q6P499 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
NIPAL3Q6P499 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
NIPAL3Q6P499 HES4-204ENST00000484667 667 ntTSL 3 BASIC21.46■■□□□ 1.03
NIPAL3Q6P499 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
NIPAL3Q6P499 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
NIPAL3Q6P499 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
NIPAL3Q6P499 TMEM202-AS1-202ENST00000565181 2325 ntBASIC21.46■■□□□ 1.03
NIPAL3Q6P499 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
NIPAL3Q6P499 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
NIPAL3Q6P499 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
NIPAL3Q6P499 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
NIPAL3Q6P499 ABHD17AP5-201ENST00000580133 923 ntBASIC21.45■■□□□ 1.02
NIPAL3Q6P499 RAP2CP1-202ENST00000605179 643 ntBASIC21.45■■□□□ 1.02
NIPAL3Q6P499 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
NIPAL3Q6P499 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC21.45■■□□□ 1.02
NIPAL3Q6P499 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
NIPAL3Q6P499 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
NIPAL3Q6P499 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
NIPAL3Q6P499 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
NIPAL3Q6P499 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
NIPAL3Q6P499 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
NIPAL3Q6P499 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
NIPAL3Q6P499 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
NIPAL3Q6P499 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
NIPAL3Q6P499 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
NIPAL3Q6P499 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
NIPAL3Q6P499 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC21.44■■□□□ 1.02
NIPAL3Q6P499 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
NIPAL3Q6P499 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
NIPAL3Q6P499 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC21.43■■□□□ 1.02
NIPAL3Q6P499 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
NIPAL3Q6P499 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.43■■□□□ 1.02
NIPAL3Q6P499 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
NIPAL3Q6P499 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC21.43■■□□□ 1.02
NIPAL3Q6P499 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
NIPAL3Q6P499 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
NIPAL3Q6P499 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
NIPAL3Q6P499 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
NIPAL3Q6P499 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
NIPAL3Q6P499 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
NIPAL3Q6P499 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
NIPAL3Q6P499 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC21.41■■□□□ 1.02
NIPAL3Q6P499 EED-207ENST00000528180 1745 ntTSL 5 BASIC21.41■■□□□ 1.02
NIPAL3Q6P499 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
NIPAL3Q6P499 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
NIPAL3Q6P499 U85056.1-201ENST00000616429 682 ntBASIC21.41■■□□□ 1.02
NIPAL3Q6P499 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
NIPAL3Q6P499 AC097639.1-201ENST00000565519 1891 ntBASIC21.41■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms