Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC27.41■■□□□ 1.98
USH1GQ495M9 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC27.41■■□□□ 1.98
USH1GQ495M9 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC27.41■■□□□ 1.98
USH1GQ495M9 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC27.4■■□□□ 1.98
USH1GQ495M9 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC27.4■■□□□ 1.98
USH1GQ495M9 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
USH1GQ495M9 TK2-216ENST00000564917 1156 ntTSL 3 BASIC27.4■■□□□ 1.98
USH1GQ495M9 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC27.4■■□□□ 1.98
USH1GQ495M9 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC27.4■■□□□ 1.98
USH1GQ495M9 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
USH1GQ495M9 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC27.39■■□□□ 1.98
USH1GQ495M9 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.97
USH1GQ495M9 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC27.39■■□□□ 1.97
USH1GQ495M9 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
USH1GQ495M9 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC27.38■■□□□ 1.97
USH1GQ495M9 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
USH1GQ495M9 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC27.38■■□□□ 1.97
USH1GQ495M9 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
USH1GQ495M9 RNF146-205ENST00000477776 762 ntTSL 3 BASIC27.38■■□□□ 1.97
USH1GQ495M9 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
USH1GQ495M9 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC27.38■■□□□ 1.97
USH1GQ495M9 AC092803.2-201ENST00000564287 1899 ntBASIC27.38■■□□□ 1.97
USH1GQ495M9 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
USH1GQ495M9 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
USH1GQ495M9 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
USH1GQ495M9 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
USH1GQ495M9 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
USH1GQ495M9 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
USH1GQ495M9 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
USH1GQ495M9 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC27.36■■□□□ 1.97
USH1GQ495M9 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
USH1GQ495M9 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC27.36■■□□□ 1.97
USH1GQ495M9 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
USH1GQ495M9 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC27.35■■□□□ 1.97
USH1GQ495M9 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC27.35■■□□□ 1.97
USH1GQ495M9 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC27.35■■□□□ 1.97
USH1GQ495M9 AC010501.1-201ENST00000606270 1962 ntBASIC27.35■■□□□ 1.97
USH1GQ495M9 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
USH1GQ495M9 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
USH1GQ495M9 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
USH1GQ495M9 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC27.35■■□□□ 1.97
USH1GQ495M9 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC27.35■■□□□ 1.97
USH1GQ495M9 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC27.35■■□□□ 1.97
USH1GQ495M9 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
USH1GQ495M9 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
USH1GQ495M9 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC27.34■■□□□ 1.97
USH1GQ495M9 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC27.34■■□□□ 1.97
USH1GQ495M9 OR2A1-AS1-204ENST00000470435 602 ntBASIC27.34■■□□□ 1.97
USH1GQ495M9 THA1P-201ENST00000590384 1145 ntBASIC27.34■■□□□ 1.97
USH1GQ495M9 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
USH1GQ495M9 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC27.34■■□□□ 1.97
USH1GQ495M9 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
USH1GQ495M9 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
USH1GQ495M9 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
USH1GQ495M9 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC27.33■■□□□ 1.97
USH1GQ495M9 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC27.33■■□□□ 1.97
USH1GQ495M9 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
USH1GQ495M9 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
USH1GQ495M9 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
USH1GQ495M9 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
USH1GQ495M9 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
USH1GQ495M9 AL592295.1-201ENST00000400984 884 ntBASIC27.33■■□□□ 1.97
USH1GQ495M9 HES6-204ENST00000409182 863 ntTSL 2 BASIC27.33■■□□□ 1.97
USH1GQ495M9 AC120024.1-201ENST00000562672 995 ntBASIC27.33■■□□□ 1.97
USH1GQ495M9 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC27.33■■□□□ 1.97
USH1GQ495M9 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC27.33■■□□□ 1.96
USH1GQ495M9 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
USH1GQ495M9 KRT18P24-201ENST00000344739 1156 ntBASIC27.32■■□□□ 1.96
USH1GQ495M9 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
USH1GQ495M9 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC27.32■■□□□ 1.96
USH1GQ495M9 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC27.32■■□□□ 1.96
USH1GQ495M9 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC27.32■■□□□ 1.96
USH1GQ495M9 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC27.31■■□□□ 1.96
USH1GQ495M9 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
USH1GQ495M9 AC239859.2-201ENST00000444165 318 ntBASIC27.31■■□□□ 1.96
USH1GQ495M9 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
USH1GQ495M9 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC27.31■■□□□ 1.96
USH1GQ495M9 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
USH1GQ495M9 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
USH1GQ495M9 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
USH1GQ495M9 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC27.3■■□□□ 1.96
USH1GQ495M9 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC27.3■■□□□ 1.96
USH1GQ495M9 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
USH1GQ495M9 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC27.29■■□□□ 1.96
USH1GQ495M9 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC27.29■■□□□ 1.96
USH1GQ495M9 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC27.29■■□□□ 1.96
USH1GQ495M9 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC27.29■■□□□ 1.96
USH1GQ495M9 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC27.29■■□□□ 1.96
USH1GQ495M9 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC27.29■■□□□ 1.96
USH1GQ495M9 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC27.29■■□□□ 1.96
USH1GQ495M9 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC27.28■■□□□ 1.96
USH1GQ495M9 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
USH1GQ495M9 GUSBP5-201ENST00000418136 578 ntBASIC27.28■■□□□ 1.96
USH1GQ495M9 AC097639.1-201ENST00000565519 1891 ntBASIC27.27■■□□□ 1.96
USH1GQ495M9 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
USH1GQ495M9 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
USH1GQ495M9 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC27.27■■□□□ 1.96
USH1GQ495M9 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC27.27■■□□□ 1.96
USH1GQ495M9 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC27.27■■□□□ 1.96
USH1GQ495M9 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC27.27■■□□□ 1.96
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms