Protein–RNA interactions for Protein: Q08285

RRP40, Exosome complex component RRP40, yeastyeast

Known RBP Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RRP40Q08285 RPS9AYPL081W 594 nt5.5□□□□□ -1.53
RRP40Q08285 YBR226CYBR226C 411 nt5.5□□□□□ -1.53
RRP40Q08285 STE13YOR219C 2796 nt5.5□□□□□ -1.53
RRP40Q08285 FAT3YKL187C 2253 nt5.49□□□□□ -1.53
RRP40Q08285 RME1YGR044C 903 nt5.49□□□□□ -1.53
RRP40Q08285 RPE1YJL121C 717 nt5.49□□□□□ -1.53
RRP40Q08285 RPN7YPR108W 1290 nt5.49□□□□□ -1.53
RRP40Q08285 MCM6YGL201C 3054 nt5.49□□□□□ -1.53
RRP40Q08285 YPK2YMR104C 2034 nt5.48□□□□□ -1.53
RRP40Q08285 PUF3YLL013C 2640 nt5.48□□□□□ -1.53
RRP40Q08285 VRP1YLR337C 2454 nt5.48□□□□□ -1.53
RRP40Q08285 GEX1YCL073C 1848 nt5.48□□□□□ -1.53
RRP40Q08285 GEX2YKR106W 1848 nt5.48□□□□□ -1.53
RRP40Q08285 NSE5YML023C 1671 nt5.47□□□□□ -1.53
RRP40Q08285 IRS4YKR019C 1848 nt5.47□□□□□ -1.53
RRP40Q08285 RPL7AYGL076C 735 nt5.47□□□□□ -1.53
RRP40Q08285 EGD2YHR193C 525 nt5.47□□□□□ -1.53
RRP40Q08285 RPL7BYPL198W 735 nt5.47□□□□□ -1.53
RRP40Q08285 ALT1YLR089C 1779 nt5.47□□□□□ -1.53
RRP40Q08285 VPS4YPR173C 1314 nt5.47□□□□□ -1.53
RRP40Q08285 SCT1YBL011W 2280 nt5.46□□□□□ -1.53
RRP40Q08285 PKC1YBL105C 3456 nt5.46□□□□□ -1.53
RRP40Q08285 RRP46YGR095C 672 nt5.46□□□□□ -1.54
RRP40Q08285 LYS12YIL094C 1116 nt5.46□□□□□ -1.54
RRP40Q08285 SNO4YMR322C 714 nt5.46□□□□□ -1.54
RRP40Q08285 VMA4YOR332W 702 nt5.46□□□□□ -1.54
RRP40Q08285 HSP33YOR391C 714 nt5.46□□□□□ -1.54
RRP40Q08285 YBR056C-BYBR056C-B 159 nt5.46□□□□□ -1.54
RRP40Q08285 HSP32YPL280W 714 nt5.46□□□□□ -1.54
RRP40Q08285 GAT1YFL021W 1533 nt5.46□□□□□ -1.54
RRP40Q08285 DIA3YDL024C 1407 nt5.46□□□□□ -1.54
RRP40Q08285 GLE1YDL207W 1617 nt5.45□□□□□ -1.54
RRP40Q08285 MKK2YPL140C 1521 nt5.45□□□□□ -1.54
RRP40Q08285 YDL114WYDL114W 927 nt5.45□□□□□ -1.54
RRP40Q08285 RPS2YGL123W 765 nt5.45□□□□□ -1.54
RRP40Q08285 RRP4YHR069C 1080 nt5.45□□□□□ -1.54
RRP40Q08285 STM1YLR150W 822 nt5.45□□□□□ -1.54
RRP40Q08285 TAL1YLR354C 1008 nt5.45□□□□□ -1.54
RRP40Q08285 CPA1YOR303W 1236 nt5.45□□□□□ -1.54
RRP40Q08285 YML082WYML082W 1950 nt5.45□□□□□ -1.54
RRP40Q08285 ERC1YHR032W 1746 nt5.45□□□□□ -1.54
RRP40Q08285 HSP78YDR258C 2436 nt5.44□□□□□ -1.54
RRP40Q08285 AMD1YML035C 2433 nt5.44□□□□□ -1.54
RRP40Q08285 KEX2YNL238W 2445 nt5.44□□□□□ -1.54
RRP40Q08285 MAK32YCR019W 1092 nt5.44□□□□□ -1.54
RRP40Q08285 YDL144CYDL144C 1071 nt5.44□□□□□ -1.54
RRP40Q08285 YER148W-AYER148W-A 579 nt5.44□□□□□ -1.54
RRP40Q08285 YER186CYER186C 921 nt5.44□□□□□ -1.54
RRP40Q08285 APS3YJL024C 585 nt5.44□□□□□ -1.54
RRP40Q08285 NPA3YJR072C 1158 nt5.44□□□□□ -1.54
RRP40Q08285 SCO2YBR024W 906 nt5.44□□□□□ -1.54
RRP40Q08285 NHP6BYBR089C-A 300 nt5.44□□□□□ -1.54
RRP40Q08285 ATO3YDR384C 828 nt5.43□□□□□ -1.54
RRP40Q08285 SEC20YDR498C 1152 nt5.43□□□□□ -1.54
RRP40Q08285 GDA1YEL042W 1557 nt5.42□□□□□ -1.54
RRP40Q08285 HSP104YLL026W 2727 nt5.42□□□□□ -1.54
RRP40Q08285 PYC1YGL062W 3537 nt5.42□□□□□ -1.54
RRP40Q08285 VPS70YJR126C 2436 nt5.42□□□□□ -1.54
RRP40Q08285 MDH3YDL078C 1032 nt5.42□□□□□ -1.54
RRP40Q08285 YEA6YEL006W 1008 nt5.42□□□□□ -1.54
RRP40Q08285 CDC16YKL022C 2523 nt5.42□□□□□ -1.54
RRP40Q08285 GPT2YKR067W 2232 nt5.42□□□□□ -1.54
RRP40Q08285 ASN1YPR145W 1719 nt5.41□□□□□ -1.54
RRP40Q08285 YCL065WYCL065W 369 nt5.41□□□□□ -1.54
RRP40Q08285 YCR047W-AYCR047W-A 207 nt5.41□□□□□ -1.54
RRP40Q08285 KSS1YGR040W 1107 nt5.41□□□□□ -1.54
RRP40Q08285 RPL10YLR075W 666 nt5.41□□□□□ -1.54
RRP40Q08285 YRF1-4YLR466W 4149 nt5.41□□□□□ -1.54
RRP40Q08285 EMW1YNL313C 2715 nt5.4□□□□□ -1.54
RRP40Q08285 GUP2YPL189W 1830 nt5.4□□□□□ -1.54
RRP40Q08285 YRA1YDR381W 681 nt5.4□□□□□ -1.54
RRP40Q08285 IRC7YFR055W 1023 nt5.4□□□□□ -1.54
RRP40Q08285 SYF2YGR129W 648 nt5.4□□□□□ -1.54
RRP40Q08285 PAN6YIL145C 930 nt5.4□□□□□ -1.54
RRP40Q08285 MTF2YDL044C 1323 nt5.4□□□□□ -1.55
RRP40Q08285 YER010CYER010C 705 nt5.39□□□□□ -1.55
RRP40Q08285 ERP5YHR110W 639 nt5.39□□□□□ -1.55
RRP40Q08285 SSP120YLR250W 705 nt5.39□□□□□ -1.55
RRP40Q08285 MLC2YPR188C 492 nt5.39□□□□□ -1.55
RRP40Q08285 SFB3YHR098C 2790 nt5.39□□□□□ -1.55
RRP40Q08285 VBA1YMR088C 1689 nt5.39□□□□□ -1.55
RRP40Q08285 SPS22YCL048W 1392 nt5.39□□□□□ -1.55
RRP40Q08285 CLB1YGR108W 1416 nt5.39□□□□□ -1.55
RRP40Q08285 ORC5YNL261W 1440 nt5.39□□□□□ -1.55
RRP40Q08285 TNA1YGR260W 1605 nt5.38□□□□□ -1.55
RRP40Q08285 RNR3YIL066C 2610 nt5.38□□□□□ -1.55
RRP40Q08285 YDL172CYDL172C 480 nt5.38□□□□□ -1.55
RRP40Q08285 YJL171CYJL171C 1191 nt5.38□□□□□ -1.55
RRP40Q08285 CSG2YBR036C 1233 nt5.38□□□□□ -1.55
RRP40Q08285 PRP46YPL151C 1356 nt5.38□□□□□ -1.55
RRP40Q08285 SET5YHR207C 1581 nt5.38□□□□□ -1.55
RRP40Q08285 PAP2YOL115W 1755 nt5.37□□□□□ -1.55
RRP40Q08285 VNX1YNL321W 2727 nt5.37□□□□□ -1.55
RRP40Q08285 YDL119CYDL119C 924 nt5.37□□□□□ -1.55
RRP40Q08285 CBP4YGR174C 513 nt5.37□□□□□ -1.55
RRP40Q08285 YME1YPR024W 2244 nt5.37□□□□□ -1.55
RRP40Q08285 YPL277CYPL277C 1464 nt5.37□□□□□ -1.55
RRP40Q08285 AAP1YHR047C 2571 nt5.37□□□□□ -1.55
RRP40Q08285 LST8YNL006W 912 nt5.36□□□□□ -1.55
RRP40Q08285 MRPL22YNL177C 930 nt5.36□□□□□ -1.55
Retrieved 100 of 7,029 protein–RNA pairs in 20.7 ms