Protein–RNA interactions for Protein: P60842

EIF4A1, Eukaryotic initiation factor 4A-I, humanhuman

Known RBP Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4A1P60842 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC30.74■■■□□ 2.51
EIF4A1P60842 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC30.74■■■□□ 2.51
EIF4A1P60842 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
EIF4A1P60842 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
EIF4A1P60842 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC30.73■■■□□ 2.51
EIF4A1P60842 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC30.73■■■□□ 2.51
EIF4A1P60842 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC30.73■■■□□ 2.51
EIF4A1P60842 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC30.73■■■□□ 2.51
EIF4A1P60842 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC30.73■■■□□ 2.51
EIF4A1P60842 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
EIF4A1P60842 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
EIF4A1P60842 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
EIF4A1P60842 Z92544.1-202ENST00000571933 1220 ntBASIC30.72■■■□□ 2.51
EIF4A1P60842 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC30.72■■■□□ 2.51
EIF4A1P60842 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC30.72■■■□□ 2.51
EIF4A1P60842 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
EIF4A1P60842 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
EIF4A1P60842 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC30.71■■■□□ 2.51
EIF4A1P60842 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC30.71■■■□□ 2.51
EIF4A1P60842 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC30.71■■■□□ 2.51
EIF4A1P60842 THA1P-201ENST00000590384 1145 ntBASIC30.71■■■□□ 2.51
EIF4A1P60842 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC30.71■■■□□ 2.51
EIF4A1P60842 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC30.7■■■□□ 2.51
EIF4A1P60842 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC30.7■■■□□ 2.51
EIF4A1P60842 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
EIF4A1P60842 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
EIF4A1P60842 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
EIF4A1P60842 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC30.69■■■□□ 2.5
EIF4A1P60842 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
EIF4A1P60842 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
EIF4A1P60842 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
EIF4A1P60842 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
EIF4A1P60842 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
EIF4A1P60842 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC30.68■■■□□ 2.5
EIF4A1P60842 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC30.68■■■□□ 2.5
EIF4A1P60842 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
EIF4A1P60842 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC30.68■■■□□ 2.5
EIF4A1P60842 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC30.68■■■□□ 2.5
EIF4A1P60842 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC30.68■■■□□ 2.5
EIF4A1P60842 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC30.68■■■□□ 2.5
EIF4A1P60842 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC30.68■■■□□ 2.5
EIF4A1P60842 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC30.68■■■□□ 2.5
EIF4A1P60842 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
EIF4A1P60842 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
EIF4A1P60842 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC30.66■■■□□ 2.5
EIF4A1P60842 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
EIF4A1P60842 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC30.66■■■□□ 2.5
EIF4A1P60842 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC30.66■■■□□ 2.5
EIF4A1P60842 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
EIF4A1P60842 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC30.66■■■□□ 2.5
EIF4A1P60842 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC30.65■■■□□ 2.5
EIF4A1P60842 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC30.65■■■□□ 2.5
EIF4A1P60842 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
EIF4A1P60842 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC30.65■■■□□ 2.5
EIF4A1P60842 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
EIF4A1P60842 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
EIF4A1P60842 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
EIF4A1P60842 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
EIF4A1P60842 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC30.64■■■□□ 2.5
EIF4A1P60842 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
EIF4A1P60842 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC30.64■■■□□ 2.5
EIF4A1P60842 AC137630.3-201ENST00000607245 391 ntBASIC30.64■■■□□ 2.5
EIF4A1P60842 AC010501.1-201ENST00000606270 1962 ntBASIC30.63■■■□□ 2.49
EIF4A1P60842 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
EIF4A1P60842 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
EIF4A1P60842 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
EIF4A1P60842 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC30.62■■■□□ 2.49
EIF4A1P60842 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
EIF4A1P60842 CREM-229ENST00000474362 1030 ntTSL 2 BASIC30.62■■■□□ 2.49
EIF4A1P60842 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC30.62■■■□□ 2.49
EIF4A1P60842 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC30.62■■■□□ 2.49
EIF4A1P60842 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
EIF4A1P60842 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
EIF4A1P60842 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
EIF4A1P60842 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC30.61■■■□□ 2.49
EIF4A1P60842 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
EIF4A1P60842 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
EIF4A1P60842 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
EIF4A1P60842 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
EIF4A1P60842 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
EIF4A1P60842 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC30.6■■■□□ 2.49
EIF4A1P60842 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
EIF4A1P60842 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC30.6■■■□□ 2.49
EIF4A1P60842 MIR4281-201ENST00000580852 62 ntBASIC30.6■■■□□ 2.49
EIF4A1P60842 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
EIF4A1P60842 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
EIF4A1P60842 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC30.59■■■□□ 2.49
EIF4A1P60842 BX664725.1-201ENST00000438252 379 ntBASIC30.59■■■□□ 2.49
EIF4A1P60842 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
EIF4A1P60842 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC30.58■■■□□ 2.49
EIF4A1P60842 FOXO3B-201ENST00000395675 1928 ntBASIC30.58■■■□□ 2.49
EIF4A1P60842 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC30.58■■■□□ 2.49
EIF4A1P60842 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
EIF4A1P60842 MIR4787-201ENST00000607364 84 ntBASIC30.58■■■□□ 2.49
EIF4A1P60842 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
EIF4A1P60842 AC092803.2-201ENST00000564287 1899 ntBASIC30.58■■■□□ 2.49
EIF4A1P60842 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
EIF4A1P60842 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC30.57■■■□□ 2.48
EIF4A1P60842 AL356441.2-201ENST00000443009 864 ntBASIC30.57■■■□□ 2.48
EIF4A1P60842 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC30.57■■■□□ 2.48
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms