Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC25.23■■□□□ 1.63
CLCN4P51793 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
CLCN4P51793 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
CLCN4P51793 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC25.23■■□□□ 1.63
CLCN4P51793 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
CLCN4P51793 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC25.22■■□□□ 1.63
CLCN4P51793 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
CLCN4P51793 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
CLCN4P51793 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
CLCN4P51793 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC25.2■■□□□ 1.62
CLCN4P51793 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC25.2■■□□□ 1.62
CLCN4P51793 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC25.2■■□□□ 1.62
CLCN4P51793 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC25.19■■□□□ 1.62
CLCN4P51793 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC25.19■■□□□ 1.62
CLCN4P51793 MIR935-201ENST00000401179 91 ntBASIC25.19■■□□□ 1.62
CLCN4P51793 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
CLCN4P51793 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC25.19■■□□□ 1.62
CLCN4P51793 TRIR-202ENST00000588213 841 ntTSL 3 BASIC25.19■■□□□ 1.62
CLCN4P51793 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC25.19■■□□□ 1.62
CLCN4P51793 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
CLCN4P51793 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
CLCN4P51793 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC25.19■■□□□ 1.62
CLCN4P51793 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
CLCN4P51793 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
CLCN4P51793 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
CLCN4P51793 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC25.18■■□□□ 1.62
CLCN4P51793 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
CLCN4P51793 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC25.18■■□□□ 1.62
CLCN4P51793 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC25.18■■□□□ 1.62
CLCN4P51793 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC25.18■■□□□ 1.62
CLCN4P51793 AC131281.2-201ENST00000520478 145 ntBASIC25.18■■□□□ 1.62
CLCN4P51793 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
CLCN4P51793 MIR638-201ENST00000385237 100 ntBASIC25.17■■□□□ 1.62
CLCN4P51793 RPP21-222ENST00000433076 577 ntTSL 2 BASIC25.17■■□□□ 1.62
CLCN4P51793 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC25.17■■□□□ 1.62
CLCN4P51793 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC25.17■■□□□ 1.62
CLCN4P51793 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
CLCN4P51793 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
CLCN4P51793 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC25.17■■□□□ 1.62
CLCN4P51793 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
CLCN4P51793 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC25.16■■□□□ 1.62
CLCN4P51793 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC25.16■■□□□ 1.62
CLCN4P51793 SRR-208ENST00000576848 588 ntTSL 4 BASIC25.16■■□□□ 1.62
CLCN4P51793 AC011551.1-201ENST00000614101 683 ntBASIC25.16■■□□□ 1.62
CLCN4P51793 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC25.15■■□□□ 1.62
CLCN4P51793 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC25.15■■□□□ 1.62
CLCN4P51793 AC010997.5-201ENST00000609182 354 ntBASIC25.15■■□□□ 1.62
CLCN4P51793 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC25.15■■□□□ 1.62
CLCN4P51793 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
CLCN4P51793 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
CLCN4P51793 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
CLCN4P51793 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
CLCN4P51793 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
CLCN4P51793 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
CLCN4P51793 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC25.14■■□□□ 1.62
CLCN4P51793 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC25.14■■□□□ 1.62
CLCN4P51793 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC25.14■■□□□ 1.62
CLCN4P51793 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC25.14■■□□□ 1.62
CLCN4P51793 GAK-223ENST00000628912 497 ntTSL 5 BASIC25.14■■□□□ 1.62
CLCN4P51793 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
CLCN4P51793 SNAI3-AS1-204ENST00000567997 2048 ntBASIC25.13■■□□□ 1.61
CLCN4P51793 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC25.13■■□□□ 1.61
CLCN4P51793 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
CLCN4P51793 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC25.13■■□□□ 1.61
CLCN4P51793 AL139246.5-201ENST00000606645 996 ntBASIC25.13■■□□□ 1.61
CLCN4P51793 AL117332.1-201ENST00000622628 974 ntBASIC25.13■■□□□ 1.61
CLCN4P51793 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC25.13■■□□□ 1.61
CLCN4P51793 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
CLCN4P51793 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
CLCN4P51793 SENP5-202ENST00000419026 973 ntTSL 3 BASIC25.12■■□□□ 1.61
CLCN4P51793 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC25.12■■□□□ 1.61
CLCN4P51793 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC25.12■■□□□ 1.61
CLCN4P51793 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC25.12■■□□□ 1.61
CLCN4P51793 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC25.12■■□□□ 1.61
CLCN4P51793 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CLCN4P51793 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
CLCN4P51793 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC25.11■■□□□ 1.61
CLCN4P51793 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
CLCN4P51793 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC25.11■■□□□ 1.61
CLCN4P51793 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC25.11■■□□□ 1.61
CLCN4P51793 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC25.11■■□□□ 1.61
CLCN4P51793 SHF-208ENST00000560734 1731 ntTSL 3 BASIC25.11■■□□□ 1.61
CLCN4P51793 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC25.11■■□□□ 1.61
CLCN4P51793 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC25.11■■□□□ 1.61
CLCN4P51793 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC25.11■■□□□ 1.61
CLCN4P51793 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CLCN4P51793 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CLCN4P51793 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CLCN4P51793 NALT1-201ENST00000429224 738 ntTSL 5 BASIC25.1■■□□□ 1.61
CLCN4P51793 MIR6724-1-201ENST00000616420 92 ntBASIC25.1■■□□□ 1.61
CLCN4P51793 MIR6724-2-201ENST00000616483 92 ntBASIC25.1■■□□□ 1.61
CLCN4P51793 MIR6724-4-201ENST00000617390 92 ntBASIC25.1■■□□□ 1.61
CLCN4P51793 MIR6724-3-201ENST00000622482 92 ntBASIC25.1■■□□□ 1.61
CLCN4P51793 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CLCN4P51793 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC25.1■■□□□ 1.61
CLCN4P51793 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC25.09■■□□□ 1.61
CLCN4P51793 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC25.09■■□□□ 1.61
CLCN4P51793 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC25.09■■□□□ 1.61
CLCN4P51793 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
CLCN4P51793 MIR3621-201ENST00000580529 85 ntBASIC25.09■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms