Protein–RNA interactions for Protein: P38854

TDA11, Topoisomerase I damage affected protein 11, yeastyeast

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TDA11P38854 RRT2YBR246W 1164 nt5.76□□□□□ -1.49
TDA11P38854 YFR006WYFR006W 1608 nt5.76□□□□□ -1.49
TDA11P38854 MCM3YEL032W 2916 nt5.76□□□□□ -1.49
TDA11P38854 YEL077CYEL077C 3834 nt5.76□□□□□ -1.49
TDA11P38854 SIA1YOR137C 1869 nt5.75□□□□□ -1.49
TDA11P38854 MDH3YDL078C 1032 nt5.75□□□□□ -1.49
TDA11P38854 RPS2YGL123W 765 nt5.75□□□□□ -1.49
TDA11P38854 YHM2YMR241W 945 nt5.75□□□□□ -1.49
TDA11P38854 SUB2YDL084W 1341 nt5.74□□□□□ -1.49
TDA11P38854 GYP1YOR070C 1914 nt5.74□□□□□ -1.49
TDA11P38854 YFL052WYFL052W 1398 nt5.74□□□□□ -1.49
TDA11P38854 NSE5YML023C 1671 nt5.73□□□□□ -1.49
TDA11P38854 YER186CYER186C 921 nt5.73□□□□□ -1.49
TDA11P38854 ASK1YKL052C 879 nt5.73□□□□□ -1.49
TDA11P38854 MID1YNL291C 1647 nt5.73□□□□□ -1.49
TDA11P38854 PTC3YBL056W 1407 nt5.73□□□□□ -1.49
TDA11P38854 ICL1YER065C 1674 nt5.72□□□□□ -1.49
TDA11P38854 HVG1YER039C 750 nt5.72□□□□□ -1.49
TDA11P38854 FPR3YML074C 1236 nt5.72□□□□□ -1.49
TDA11P38854 DIA3YDL024C 1407 nt5.72□□□□□ -1.49
TDA11P38854 RPT2YDL007W 1314 nt5.72□□□□□ -1.49
TDA11P38854 CMR1YDL156W 1569 nt5.72□□□□□ -1.49
TDA11P38854 UGX2YDL169C 672 nt5.71□□□□□ -1.5
TDA11P38854 SFC1YJR095W 969 nt5.71□□□□□ -1.5
TDA11P38854 TSA1YML028W 591 nt5.71□□□□□ -1.5
TDA11P38854 PSH1YOL054W 1221 nt5.71□□□□□ -1.5
TDA11P38854 RBD2YPL246C 789 nt5.71□□□□□ -1.5
TDA11P38854 YPR098CYPR098C 486 nt5.71□□□□□ -1.5
TDA11P38854 ATF1YOR377W 1578 nt5.71□□□□□ -1.5
TDA11P38854 ERG1YGR175C 1491 nt5.71□□□□□ -1.5
TDA11P38854 HPF1YOL155C 2904 nt5.7□□□□□ -1.5
TDA11P38854 TRP1YDR007W 675 nt5.7□□□□□ -1.5
TDA11P38854 MOG1YJR074W 657 nt5.7□□□□□ -1.5
TDA11P38854 HOR7YMR251W-A 180 nt5.7□□□□□ -1.5
TDA11P38854 RRS1YOR294W 612 nt5.7□□□□□ -1.5
TDA11P38854 RRN3YKL125W 1884 nt5.69□□□□□ -1.5
TDA11P38854 HEM3YDL205C 984 nt5.69□□□□□ -1.5
TDA11P38854 PRS1YKL181W 1284 nt5.69□□□□□ -1.5
TDA11P38854 STM1YLR150W 822 nt5.69□□□□□ -1.5
TDA11P38854 TSR3YOR006C 942 nt5.69□□□□□ -1.5
TDA11P38854 UIP4YPL186C 915 nt5.69□□□□□ -1.5
TDA11P38854 NRD1YNL251C 1728 nt5.68□□□□□ -1.5
TDA11P38854 RVB2YPL235W 1416 nt5.68□□□□□ -1.5
TDA11P38854 YPR114WYPR114W 948 nt5.68□□□□□ -1.5
TDA11P38854 FLC3YGL139W 2409 nt5.68□□□□□ -1.5
TDA11P38854 FRE3YOR381W 2136 nt5.68□□□□□ -1.5
TDA11P38854 JIP4YDR475C 2631 nt5.67□□□□□ -1.5
TDA11P38854 TIM22YDL217C 624 nt5.67□□□□□ -1.5
TDA11P38854 DBF4YDR052C 2115 nt5.67□□□□□ -1.5
TDA11P38854 YEL068CYEL068C 333 nt5.67□□□□□ -1.5
TDA11P38854 COG1YGL223C 1254 nt5.67□□□□□ -1.5
TDA11P38854 RMA1YKL132C 1293 nt5.67□□□□□ -1.5
TDA11P38854 SPG4YMR107W 348 nt5.67□□□□□ -1.5
TDA11P38854 YOR200WYOR200W 399 nt5.67□□□□□ -1.5
TDA11P38854 CWC27YPL064C 906 nt5.67□□□□□ -1.5
TDA11P38854 CHS5YLR330W 2016 nt5.67□□□□□ -1.5
TDA11P38854 ATG4YNL223W 1485 nt5.66□□□□□ -1.5
TDA11P38854 YKL031WYKL031W 414 nt5.66□□□□□ -1.5
TDA11P38854 GFD1YMR255W 567 nt5.66□□□□□ -1.5
TDA11P38854 GLC8YMR311C 690 nt5.66□□□□□ -1.5
TDA11P38854 YTH1YPR107C 627 nt5.66□□□□□ -1.5
TDA11P38854 YRF1-4YLR466W 4149 nt5.66□□□□□ -1.5
TDA11P38854 PCS60YBR222C 1632 nt5.66□□□□□ -1.5
TDA11P38854 VRP1YLR337C 2454 nt5.65□□□□□ -1.5
TDA11P38854 PDH1YPR002W 1551 nt5.65□□□□□ -1.5
TDA11P38854 RAD59YDL059C 717 nt5.65□□□□□ -1.5
TDA11P38854 CDC34YDR054C 888 nt5.65□□□□□ -1.5
TDA11P38854 SDH4YDR178W 546 nt5.65□□□□□ -1.5
TDA11P38854 IRC7YFR055W 1023 nt5.65□□□□□ -1.5
TDA11P38854 KSS1YGR040W 1107 nt5.65□□□□□ -1.5
TDA11P38854 YIL060WYIL060W 435 nt5.65□□□□□ -1.5
TDA11P38854 YJR084WYJR084W 1272 nt5.65□□□□□ -1.5
TDA11P38854 SEN34YAR008W 828 nt5.65□□□□□ -1.5
TDA11P38854 ELP3YPL086C 1674 nt5.65□□□□□ -1.51
TDA11P38854 DUR1,2YBR208C 5508 nt5.65□□□□□ -1.51
TDA11P38854 SEC12YNR026C 1416 nt5.65□□□□□ -1.51
TDA11P38854 YDL144CYDL144C 1071 nt5.64□□□□□ -1.51
TDA11P38854 SSY5YJL156C 2100 nt5.64□□□□□ -1.51
TDA11P38854 ODC2YOR222W 924 nt5.64□□□□□ -1.51
TDA11P38854 MDM31YHR194W 1740 nt5.64□□□□□ -1.51
TDA11P38854 GIT1YCR098C 1557 nt5.63□□□□□ -1.51
TDA11P38854 AMD1YML035C 2433 nt5.63□□□□□ -1.51
TDA11P38854 COX20YDR231C 618 nt5.63□□□□□ -1.51
TDA11P38854 BUD32YGR262C 786 nt5.63□□□□□ -1.51
TDA11P38854 TIF2YJL138C 1188 nt5.63□□□□□ -1.51
TDA11P38854 TIF1YKR059W 1188 nt5.63□□□□□ -1.51
TDA11P38854 YNL285WYNL285W 372 nt5.63□□□□□ -1.51
TDA11P38854 RPT4YOR259C 1314 nt5.63□□□□□ -1.51
TDA11P38854 CRF1YDR223W 1404 nt5.63□□□□□ -1.51
TDA11P38854 SIP5YMR140W 1470 nt5.63□□□□□ -1.51
TDA11P38854 ECM14YHR132C 1293 nt5.62□□□□□ -1.51
TDA11P38854 SNN1YNL086W 309 nt5.62□□□□□ -1.51
TDA11P38854 YBL070CYBL070C 321 nt5.62□□□□□ -1.51
TDA11P38854 AAT2YLR027C 1257 nt5.61□□□□□ -1.51
TDA11P38854 GAA1YLR088W 1845 nt5.61□□□□□ -1.51
TDA11P38854 VBA1YMR088C 1689 nt5.61□□□□□ -1.51
TDA11P38854 HST2YPL015C 1074 nt5.61□□□□□ -1.51
TDA11P38854 TFC6YDR362C 2019 nt5.6□□□□□ -1.51
TDA11P38854 YHR213W-AYHR213W-A 234 nt5.6□□□□□ -1.51
TDA11P38854 YML012C-AYML012C-A 378 nt5.6□□□□□ -1.51
Retrieved 100 of 7,029 protein–RNA pairs in 18.1 ms