Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC19.35■□□□□ 0.69
SNCAP37840 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SNCAP37840 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SNCAP37840 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SNCAP37840 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SNCAP37840 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SNCAP37840 MIR219A2-201ENST00000608502 1504 ntBASIC19.34■□□□□ 0.69
SNCAP37840 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC19.34■□□□□ 0.69
SNCAP37840 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC19.34■□□□□ 0.69
SNCAP37840 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SNCAP37840 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SNCAP37840 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
SNCAP37840 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
SNCAP37840 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SNCAP37840 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SNCAP37840 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC19.33■□□□□ 0.68
SNCAP37840 DUX4L11-201ENST00000611504 1267 ntBASIC19.33■□□□□ 0.68
SNCAP37840 DUX4L12-201ENST00000614593 1267 ntBASIC19.33■□□□□ 0.68
SNCAP37840 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SNCAP37840 DUX4L14-201ENST00000621227 1267 ntBASIC19.33■□□□□ 0.68
SNCAP37840 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SNCAP37840 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SNCAP37840 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SNCAP37840 AC148477.6-201ENST00000623746 465 ntBASIC19.32■□□□□ 0.68
SNCAP37840 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
SNCAP37840 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SNCAP37840 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SNCAP37840 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SNCAP37840 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
SNCAP37840 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SNCAP37840 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SNCAP37840 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SNCAP37840 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SNCAP37840 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC19.31■□□□□ 0.68
SNCAP37840 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SNCAP37840 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SNCAP37840 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SNCAP37840 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
SNCAP37840 MLEC-202ENST00000412616 841 ntTSL 3 BASIC19.3■□□□□ 0.68
SNCAP37840 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC19.3■□□□□ 0.68
SNCAP37840 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SNCAP37840 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SNCAP37840 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SNCAP37840 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
SNCAP37840 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SNCAP37840 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SNCAP37840 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
SNCAP37840 HES6-205ENST00000409356 528 ntTSL 2 BASIC19.29■□□□□ 0.68
SNCAP37840 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SNCAP37840 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC19.29■□□□□ 0.68
SNCAP37840 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SNCAP37840 AC097639.1-201ENST00000565519 1891 ntBASIC19.28■□□□□ 0.68
SNCAP37840 AL359258.2-201ENST00000564063 1566 ntBASIC19.28■□□□□ 0.68
SNCAP37840 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SNCAP37840 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SNCAP37840 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
SNCAP37840 CHST11-203ENST00000547956 936 ntTSL 2 BASIC19.28■□□□□ 0.68
SNCAP37840 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC19.28■□□□□ 0.68
SNCAP37840 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SNCAP37840 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SNCAP37840 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SNCAP37840 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19.27■□□□□ 0.68
SNCAP37840 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC19.27■□□□□ 0.68
SNCAP37840 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SNCAP37840 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SNCAP37840 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SNCAP37840 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SNCAP37840 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SNCAP37840 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SNCAP37840 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC19.26■□□□□ 0.67
SNCAP37840 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SNCAP37840 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SNCAP37840 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SNCAP37840 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC19.26■□□□□ 0.67
SNCAP37840 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SNCAP37840 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC19.26■□□□□ 0.67
SNCAP37840 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
SNCAP37840 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SNCAP37840 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
SNCAP37840 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SNCAP37840 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SNCAP37840 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SNCAP37840 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
SNCAP37840 AGPS-202ENST00000409888 815 ntTSL 4 BASIC19.25■□□□□ 0.67
SNCAP37840 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SNCAP37840 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC19.25■□□□□ 0.67
SNCAP37840 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC19.25■□□□□ 0.67
SNCAP37840 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC19.25■□□□□ 0.67
SNCAP37840 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SNCAP37840 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SNCAP37840 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
SNCAP37840 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SNCAP37840 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SNCAP37840 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SNCAP37840 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC19.24■□□□□ 0.67
SNCAP37840 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SNCAP37840 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SNCAP37840 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
SNCAP37840 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
SNCAP37840 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms