Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC23.75■■□□□ 1.39
HMGCLP35914 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC23.75■■□□□ 1.39
HMGCLP35914 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
HMGCLP35914 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
HMGCLP35914 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC23.74■■□□□ 1.39
HMGCLP35914 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC23.74■■□□□ 1.39
HMGCLP35914 AL033527.3-201ENST00000566366 1196 ntBASIC23.74■■□□□ 1.39
HMGCLP35914 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC23.74■■□□□ 1.39
HMGCLP35914 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
HMGCLP35914 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC23.74■■□□□ 1.39
HMGCLP35914 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
HMGCLP35914 GUK1-208ENST00000366728 842 ntTSL 2 BASIC23.73■■□□□ 1.39
HMGCLP35914 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
HMGCLP35914 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
HMGCLP35914 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
HMGCLP35914 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC23.73■■□□□ 1.39
HMGCLP35914 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
HMGCLP35914 AC020928.2-201ENST00000588717 2197 ntBASIC23.73■■□□□ 1.39
HMGCLP35914 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
HMGCLP35914 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
HMGCLP35914 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
HMGCLP35914 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
HMGCLP35914 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC23.72■■□□□ 1.39
HMGCLP35914 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
HMGCLP35914 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
HMGCLP35914 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
HMGCLP35914 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
HMGCLP35914 LONRF2P2-201ENST00000439212 571 ntBASIC23.71■■□□□ 1.39
HMGCLP35914 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
HMGCLP35914 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.39
HMGCLP35914 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
HMGCLP35914 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
HMGCLP35914 AC139795.1-202ENST00000500444 432 ntBASIC23.7■■□□□ 1.38
HMGCLP35914 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC23.7■■□□□ 1.38
HMGCLP35914 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC23.7■■□□□ 1.38
HMGCLP35914 AC074183.2-201ENST00000623112 922 ntBASIC23.7■■□□□ 1.38
HMGCLP35914 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
HMGCLP35914 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.38
HMGCLP35914 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC23.7■■□□□ 1.38
HMGCLP35914 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
HMGCLP35914 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC23.7■■□□□ 1.38
HMGCLP35914 SLC6A10P-202ENST00000431994 2058 ntBASIC23.69■■□□□ 1.38
HMGCLP35914 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
HMGCLP35914 AC019171.1-201ENST00000601251 1056 ntBASIC23.69■■□□□ 1.38
HMGCLP35914 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC23.69■■□□□ 1.38
HMGCLP35914 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
HMGCLP35914 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
HMGCLP35914 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
HMGCLP35914 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
HMGCLP35914 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
HMGCLP35914 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
HMGCLP35914 MTX2-204ENST00000443241 799 ntTSL 3 BASIC23.68■■□□□ 1.38
HMGCLP35914 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC23.68■■□□□ 1.38
HMGCLP35914 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC23.68■■□□□ 1.38
HMGCLP35914 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
HMGCLP35914 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC23.67■■□□□ 1.38
HMGCLP35914 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
HMGCLP35914 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
HMGCLP35914 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC23.67■■□□□ 1.38
HMGCLP35914 FOXO3B-201ENST00000395675 1928 ntBASIC23.67■■□□□ 1.38
HMGCLP35914 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
HMGCLP35914 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
HMGCLP35914 BHLHE23-202ENST00000612929 1109 ntBASIC23.66■■□□□ 1.38
HMGCLP35914 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC23.66■■□□□ 1.38
HMGCLP35914 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
HMGCLP35914 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
HMGCLP35914 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
HMGCLP35914 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
HMGCLP35914 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
HMGCLP35914 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC23.65■■□□□ 1.38
HMGCLP35914 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
HMGCLP35914 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC23.65■■□□□ 1.38
HMGCLP35914 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
HMGCLP35914 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC23.65■■□□□ 1.38
HMGCLP35914 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
HMGCLP35914 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
HMGCLP35914 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC23.65■■□□□ 1.38
HMGCLP35914 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
HMGCLP35914 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
HMGCLP35914 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
HMGCLP35914 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.38
HMGCLP35914 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC23.64■■□□□ 1.38
HMGCLP35914 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
HMGCLP35914 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC23.64■■□□□ 1.37
HMGCLP35914 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC23.64■■□□□ 1.37
HMGCLP35914 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC23.64■■□□□ 1.37
HMGCLP35914 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC23.64■■□□□ 1.37
HMGCLP35914 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC23.64■■□□□ 1.37
HMGCLP35914 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
HMGCLP35914 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
HMGCLP35914 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
HMGCLP35914 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
HMGCLP35914 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC23.63■■□□□ 1.37
HMGCLP35914 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
HMGCLP35914 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
HMGCLP35914 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
HMGCLP35914 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
HMGCLP35914 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
HMGCLP35914 IDNK-201ENST00000376417 511 ntTSL 5 BASIC23.62■■□□□ 1.37
HMGCLP35914 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms