Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC29.76■■■□□ 2.35
PDE6BP35913 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC29.76■■■□□ 2.35
PDE6BP35913 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
PDE6BP35913 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
PDE6BP35913 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
PDE6BP35913 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC29.75■■■□□ 2.35
PDE6BP35913 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC29.75■■■□□ 2.35
PDE6BP35913 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
PDE6BP35913 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC29.74■■■□□ 2.35
PDE6BP35913 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
PDE6BP35913 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC29.74■■■□□ 2.35
PDE6BP35913 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC29.74■■■□□ 2.35
PDE6BP35913 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
PDE6BP35913 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
PDE6BP35913 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
PDE6BP35913 AK3-203ENST00000447596 705 ntTSL 2 BASIC29.73■■■□□ 2.35
PDE6BP35913 AL512631.2-201ENST00000604634 923 ntBASIC29.73■■■□□ 2.35
PDE6BP35913 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
PDE6BP35913 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC29.72■■■□□ 2.35
PDE6BP35913 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC29.72■■■□□ 2.35
PDE6BP35913 QDPR-206ENST00000508623 601 ntTSL 3 BASIC29.72■■■□□ 2.35
PDE6BP35913 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
PDE6BP35913 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
PDE6BP35913 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
PDE6BP35913 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC29.71■■■□□ 2.35
PDE6BP35913 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
PDE6BP35913 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC29.71■■■□□ 2.35
PDE6BP35913 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
PDE6BP35913 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC29.7■■■□□ 2.35
PDE6BP35913 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC29.7■■■□□ 2.34
PDE6BP35913 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
PDE6BP35913 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC29.69■■■□□ 2.34
PDE6BP35913 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
PDE6BP35913 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC29.69■■■□□ 2.34
PDE6BP35913 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC29.69■■■□□ 2.34
PDE6BP35913 CLTA-210ENST00000540080 989 ntTSL 2 BASIC29.69■■■□□ 2.34
PDE6BP35913 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
PDE6BP35913 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC29.69■■■□□ 2.34
PDE6BP35913 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC29.69■■■□□ 2.34
PDE6BP35913 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC29.68■■■□□ 2.34
PDE6BP35913 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
PDE6BP35913 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
PDE6BP35913 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
PDE6BP35913 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC29.67■■■□□ 2.34
PDE6BP35913 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC29.67■■■□□ 2.34
PDE6BP35913 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
PDE6BP35913 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC29.66■■■□□ 2.34
PDE6BP35913 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
PDE6BP35913 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC29.66■■■□□ 2.34
PDE6BP35913 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
PDE6BP35913 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC29.65■■■□□ 2.34
PDE6BP35913 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC29.65■■■□□ 2.34
PDE6BP35913 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC29.65■■■□□ 2.34
PDE6BP35913 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
PDE6BP35913 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC29.65■■■□□ 2.34
PDE6BP35913 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC29.65■■■□□ 2.34
PDE6BP35913 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC29.65■■■□□ 2.34
PDE6BP35913 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC29.64■■■□□ 2.34
PDE6BP35913 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC29.64■■■□□ 2.34
PDE6BP35913 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
PDE6BP35913 EBPL-204ENST00000378272 766 ntTSL 3 BASIC29.64■■■□□ 2.34
PDE6BP35913 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC29.64■■■□□ 2.34
PDE6BP35913 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC29.64■■■□□ 2.34
PDE6BP35913 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC29.63■■■□□ 2.33
PDE6BP35913 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC29.63■■■□□ 2.33
PDE6BP35913 CD72-202ENST00000378430 585 ntTSL 3 BASIC29.63■■■□□ 2.33
PDE6BP35913 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC29.63■■■□□ 2.33
PDE6BP35913 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC29.62■■■□□ 2.33
PDE6BP35913 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC29.62■■■□□ 2.33
PDE6BP35913 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC29.62■■■□□ 2.33
PDE6BP35913 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC29.62■■■□□ 2.33
PDE6BP35913 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
PDE6BP35913 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC29.61■■■□□ 2.33
PDE6BP35913 SSSCA1-AS1-201ENST00000567594 614 ntBASIC29.61■■■□□ 2.33
PDE6BP35913 RASSF1-AS1-201ENST00000629828 790 ntBASIC29.61■■■□□ 2.33
PDE6BP35913 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
PDE6BP35913 GUK1-205ENST00000366722 850 ntTSL 3 BASIC29.6■■■□□ 2.33
PDE6BP35913 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
PDE6BP35913 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC29.6■■■□□ 2.33
PDE6BP35913 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC29.6■■■□□ 2.33
PDE6BP35913 AC106739.1-201ENST00000617035 715 ntBASIC29.6■■■□□ 2.33
PDE6BP35913 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
PDE6BP35913 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
PDE6BP35913 AF131216.4-201ENST00000638924 1588 ntBASIC29.59■■■□□ 2.33
PDE6BP35913 SNAI3-AS1-204ENST00000567997 2048 ntBASIC29.59■■■□□ 2.33
PDE6BP35913 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC29.58■■■□□ 2.33
PDE6BP35913 AP004609.3-201ENST00000610705 1884 ntBASIC29.58■■■□□ 2.33
PDE6BP35913 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
PDE6BP35913 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC29.57■■■□□ 2.32
PDE6BP35913 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC29.57■■■□□ 2.32
PDE6BP35913 TFPT-201ENST00000391757 774 ntTSL 5 BASIC29.57■■■□□ 2.32
PDE6BP35913 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC29.57■■■□□ 2.32
PDE6BP35913 PBX2P1-201ENST00000493219 1291 ntBASIC29.57■■■□□ 2.32
PDE6BP35913 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
PDE6BP35913 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
PDE6BP35913 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC29.57■■■□□ 2.32
PDE6BP35913 ZNRF2P3-201ENST00000424200 374 ntBASIC29.56■■■□□ 2.32
PDE6BP35913 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC29.56■■■□□ 2.32
PDE6BP35913 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
PDE6BP35913 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC29.56■■■□□ 2.32
Retrieved 100 of 98,524 protein–RNA pairs in 12.1 ms