Protein–RNA interactions for Protein: P21757

MSR1, Macrophage scavenger receptor types I and II, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1P21757 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
MSR1P21757 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
MSR1P21757 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
MSR1P21757 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
MSR1P21757 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
MSR1P21757 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
MSR1P21757 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
MSR1P21757 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
MSR1P21757 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
MSR1P21757 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
MSR1P21757 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
MSR1P21757 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
MSR1P21757 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
MSR1P21757 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
MSR1P21757 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
MSR1P21757 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC20.91■□□□□ 0.94
MSR1P21757 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC20.91■□□□□ 0.94
MSR1P21757 BRD4-212ENST00000630599 726 ntTSL 2 BASIC20.91■□□□□ 0.94
MSR1P21757 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
MSR1P21757 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
MSR1P21757 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
MSR1P21757 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
MSR1P21757 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
MSR1P21757 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC20.9■□□□□ 0.94
MSR1P21757 AL592293.1-201ENST00000502889 1188 ntBASIC20.9■□□□□ 0.94
MSR1P21757 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC20.9■□□□□ 0.94
MSR1P21757 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
MSR1P21757 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
MSR1P21757 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
MSR1P21757 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
MSR1P21757 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.94
MSR1P21757 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC20.89■□□□□ 0.94
MSR1P21757 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC20.89■□□□□ 0.93
MSR1P21757 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
MSR1P21757 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC20.89■□□□□ 0.93
MSR1P21757 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
MSR1P21757 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
MSR1P21757 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
MSR1P21757 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
MSR1P21757 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
MSR1P21757 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
MSR1P21757 SLC6A10P-202ENST00000431994 2058 ntBASIC20.89■□□□□ 0.93
MSR1P21757 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
MSR1P21757 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
MSR1P21757 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
MSR1P21757 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
MSR1P21757 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
MSR1P21757 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
MSR1P21757 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
MSR1P21757 MED17-227ENST00000640521 2047 ntTSL 5 BASIC20.87■□□□□ 0.93
MSR1P21757 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
MSR1P21757 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
MSR1P21757 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
MSR1P21757 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
MSR1P21757 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
MSR1P21757 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
MSR1P21757 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC20.87■□□□□ 0.93
MSR1P21757 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC20.86■□□□□ 0.93
MSR1P21757 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
MSR1P21757 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
MSR1P21757 AC018755.3-202ENST00000596210 929 ntBASIC20.86■□□□□ 0.93
MSR1P21757 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC20.86■□□□□ 0.93
MSR1P21757 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
MSR1P21757 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
MSR1P21757 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
MSR1P21757 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
MSR1P21757 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
MSR1P21757 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
MSR1P21757 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC20.85■□□□□ 0.93
MSR1P21757 U85056.1-201ENST00000616429 682 ntBASIC20.85■□□□□ 0.93
MSR1P21757 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
MSR1P21757 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
MSR1P21757 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
MSR1P21757 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
MSR1P21757 AC138932.3-201ENST00000567634 1902 ntBASIC20.84■□□□□ 0.93
MSR1P21757 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
MSR1P21757 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
MSR1P21757 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
MSR1P21757 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
MSR1P21757 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
MSR1P21757 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
MSR1P21757 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC20.83■□□□□ 0.93
MSR1P21757 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC20.83■□□□□ 0.93
MSR1P21757 ABHD17AP5-201ENST00000580133 923 ntBASIC20.83■□□□□ 0.93
MSR1P21757 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC20.83■□□□□ 0.93
MSR1P21757 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
MSR1P21757 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
MSR1P21757 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
MSR1P21757 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
MSR1P21757 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
MSR1P21757 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC20.82■□□□□ 0.92
MSR1P21757 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC20.82■□□□□ 0.92
MSR1P21757 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
MSR1P21757 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
MSR1P21757 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC20.82■□□□□ 0.92
MSR1P21757 SPCS2P3-201ENST00000500401 656 ntBASIC20.82■□□□□ 0.92
MSR1P21757 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC20.82■□□□□ 0.92
MSR1P21757 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
MSR1P21757 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC20.81■□□□□ 0.92
MSR1P21757 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms