| TFE3 | P19532 | RABL6-204 | ENST00000371671 | 1580 nt | APPRIS ALT2 TSL 1 (best) BASIC | 24.84 | ■■□□□ 1.57 | | |
| TFE3 | P19532 | LY6H-201 | ENST00000342752 | 951 nt | APPRIS ALT2 TSL 1 (best) BASIC | 24.84 | ■■□□□ 1.57 | | |
| TFE3 | P19532 | LY6H-202 | ENST00000414417 | 1056 nt | APPRIS ALT2 TSL 1 (best) BASIC | 24.84 | ■■□□□ 1.57 | | |
| TFE3 | P19532 | LY6H-203 | ENST00000430474 | 925 nt | APPRIS P3 TSL 3 BASIC | 24.84 | ■■□□□ 1.57 | | |
| TFE3 | P19532 | TBX2-AS1-203 | ENST00000590421 | 861 nt | TSL 2 BASIC | 24.84 | ■■□□□ 1.57 | | |
| TFE3 | P19532 | KAT8-206 | ENST00000543774 | 1846 nt | APPRIS P1 TSL 5 BASIC | 24.84 | ■■□□□ 1.57 | | |
| TFE3 | P19532 | HMX2-201 | ENST00000339992 | 1628 nt | APPRIS P1 TSL 1 (best) BASIC | 24.83 | ■■□□□ 1.57 | | |
| TFE3 | P19532 | TSPY13P-201 | ENST00000338964 | 914 nt | BASIC | 24.83 | ■■□□□ 1.57 | | |
| TFE3 | P19532 | PLEKHO1-202 | ENST00000369126 | 1809 nt | TSL 1 (best) BASIC | 24.83 | ■■□□□ 1.57 | | |
| TFE3 | P19532 | REXO4-202 | ENST00000371942 | 2360 nt | APPRIS P1 TSL 1 (best) BASIC | 24.83 | ■■□□□ 1.57 | | |
| TFE3 | P19532 | SAC3D1-201 | ENST00000398846 | 1566 nt | APPRIS P1 TSL 1 (best) BASIC | 24.83 | ■■□□□ 1.57 | | |
| TFE3 | P19532 | PAOX-203 | ENST00000357296 | 1633 nt | TSL 1 (best) BASIC | 24.83 | ■■□□□ 1.56 | | |
| TFE3 | P19532 | SLC39A3-201 | ENST00000269740 | 1502 nt | APPRIS P1 TSL 1 (best) BASIC | 24.82 | ■■□□□ 1.56 | | |
| TFE3 | P19532 | MBD3-202 | ENST00000434436 | 2439 nt | APPRIS P1 TSL 1 (best) BASIC | 24.82 | ■■□□□ 1.56 | | |
| TFE3 | P19532 | CCDC37-AS1-202 | ENST00000506660 | 986 nt | TSL 1 (best) BASIC | 24.82 | ■■□□□ 1.56 | | |
| TFE3 | P19532 | AL022341.2-201 | ENST00000573609 | 1417 nt | TSL 3 BASIC | 24.82 | ■■□□□ 1.56 | | |
| TFE3 | P19532 | KLF16-204 | ENST00000617223 | 1133 nt | APPRIS P1 TSL 1 (best) BASIC | 24.82 | ■■□□□ 1.56 | | |
| TFE3 | P19532 | PRRX2-201 | ENST00000372469 | 1311 nt | APPRIS P1 TSL 1 (best) BASIC | 24.82 | ■■□□□ 1.56 | | |
| TFE3 | P19532 | ARRB2-210 | ENST00000572457 | 1660 nt | TSL 5 BASIC | 24.81 | ■■□□□ 1.56 | | |
| TFE3 | P19532 | ZSCAN1-202 | ENST00000391700 | 952 nt | TSL 1 (best) BASIC | 24.81 | ■■□□□ 1.56 | | |
| TFE3 | P19532 | PYY2-202 | ENST00000441253 | 1076 nt | TSL 1 (best) BASIC | 24.81 | ■■□□□ 1.56 | | |
| TFE3 | P19532 | RBPMS-209 | ENST00000520161 | 842 nt | TSL 2 BASIC | 24.81 | ■■□□□ 1.56 | | |
| TFE3 | P19532 | AC087393.1-201 | ENST00000582896 | 145 nt | BASIC | 24.81 | ■■□□□ 1.56 | | |
| TFE3 | P19532 | CASTOR2-201 | ENST00000616305 | 1257 nt | APPRIS P1 TSL 1 (best) BASIC | 24.81 | ■■□□□ 1.56 | | |
| TFE3 | P19532 | PTPMT1-205 | ENST00000534775 | 1611 nt | TSL 1 (best) BASIC | 24.81 | ■■□□□ 1.56 | | |
| TFE3 | P19532 | SRR-201 | ENST00000344595 | 2728 nt | APPRIS P1 TSL 1 (best) BASIC | 24.81 | ■■□□□ 1.56 | | |
| TFE3 | P19532 | PLEK2-201 | ENST00000216446 | 1549 nt | APPRIS P1 TSL 1 (best) BASIC | 24.81 | ■■□□□ 1.56 | | |
| TFE3 | P19532 | RBFOX2-209 | ENST00000438146 | 1356 nt | APPRIS P3 TSL 1 (best) BASIC | 24.8 | ■■□□□ 1.56 | | |
| TFE3 | P19532 | C16orf87-201 | ENST00000285697 | 1585 nt | APPRIS P1 TSL 1 (best) BASIC | 24.8 | ■■□□□ 1.56 | | |
| TFE3 | P19532 | UBE2E3-202 | ENST00000410062 | 1570 nt | APPRIS P1 TSL 1 (best) BASIC | 24.8 | ■■□□□ 1.56 | | |
| TFE3 | P19532 | TNFRSF12A-201 | ENST00000326577 | 1033 nt | APPRIS P1 TSL 1 (best) BASIC | 24.8 | ■■□□□ 1.56 | | |
| TFE3 | P19532 | GUK1-208 | ENST00000366728 | 842 nt | TSL 2 BASIC | 24.8 | ■■□□□ 1.56 | | |
| TFE3 | P19532 | SLC6A10P-202 | ENST00000431994 | 2058 nt | BASIC | 24.8 | ■■□□□ 1.56 | | |
| TFE3 | P19532 | HSF1-204 | ENST00000528838 | 2142 nt | APPRIS P1 TSL 1 (best) BASIC | 24.8 | ■■□□□ 1.56 | | |
| TFE3 | P19532 | FBXL6-202 | ENST00000455319 | 1727 nt | APPRIS ALT2 TSL 1 (best) BASIC | 24.8 | ■■□□□ 1.56 | | |
| TFE3 | P19532 | ARHGAP29-202 | ENST00000370217 | 2043 nt | TSL 1 (best) BASIC | 24.79 | ■■□□□ 1.56 | | |
| TFE3 | P19532 | AKT1S1-203 | ENST00000391831 | 2025 nt | APPRIS P1 TSL 2 BASIC | 24.79 | ■■□□□ 1.56 | | |
| TFE3 | P19532 | FPGS-221 | ENST00000630236 | 2160 nt | TSL 5 BASIC | 24.79 | ■■□□□ 1.56 | | |
| TFE3 | P19532 | SMKR1-201 | ENST00000462322 | 1035 nt | APPRIS P1 TSL 1 (best) BASIC | 24.79 | ■■□□□ 1.56 | | |
| TFE3 | P19532 | MTERF3-204 | ENST00000523821 | 1529 nt | TSL 1 (best) BASIC | 24.79 | ■■□□□ 1.56 | | |
| TFE3 | P19532 | JMJD8-201 | ENST00000412368 | 2038 nt | APPRIS P2 TSL 1 (best) BASIC | 24.79 | ■■□□□ 1.56 | | |
| TFE3 | P19532 | RRP9-201 | ENST00000232888 | 1578 nt | APPRIS P1 TSL 1 (best) BASIC | 24.79 | ■■□□□ 1.56 | | |
| TFE3 | P19532 | HAS2-AS1-201 | ENST00000514180 | 1656 nt | TSL 1 (best) BASIC | 24.78 | ■■□□□ 1.56 | | |
| TFE3 | P19532 | RHOBTB3-206 | ENST00000506817 | 1432 nt | TSL 2 BASIC | 24.78 | ■■□□□ 1.56 | | |
| TFE3 | P19532 | HMCES-204 | ENST00000502878 | 1952 nt | APPRIS P1 TSL 1 (best) BASIC | 24.78 | ■■□□□ 1.56 | | |
| TFE3 | P19532 | CCR10-201 | ENST00000332438 | 1773 nt | APPRIS P1 TSL 1 (best) BASIC | 24.78 | ■■□□□ 1.56 | | |
| TFE3 | P19532 | TRIM14-203 | ENST00000375098 | 1792 nt | APPRIS P1 TSL 2 BASIC | 24.78 | ■■□□□ 1.56 | | |
| TFE3 | P19532 | GPRC5B-202 | ENST00000535671 | 1215 nt | APPRIS ALT2 TSL 1 (best) BASIC | 24.78 | ■■□□□ 1.56 | | |
| TFE3 | P19532 | SDS-201 | ENST00000257549 | 1606 nt | APPRIS P1 TSL 2 BASIC | 24.78 | ■■□□□ 1.56 | | |
| TFE3 | P19532 | KCNG1-201 | ENST00000371571 | 2211 nt | APPRIS P1 TSL 1 (best) BASIC | 24.78 | ■■□□□ 1.56 | | |
| TFE3 | P19532 | PABPN1-202 | ENST00000397276 | 2768 nt | APPRIS ALT1 TSL 1 (best) BASIC | 24.77 | ■■□□□ 1.56 | | |
| TFE3 | P19532 | TAZ-205 | ENST00000475699 | 1862 nt | TSL 1 (best) BASIC | 24.77 | ■■□□□ 1.56 | | |
| TFE3 | P19532 | MAZ-203 | ENST00000545521 | 2333 nt | TSL 1 (best) BASIC | 24.77 | ■■□□□ 1.56 | | |
| TFE3 | P19532 | ERFE-207 | ENST00000546354 | 1065 nt | APPRIS P2 TSL 1 (best) BASIC | 24.77 | ■■□□□ 1.56 | | |
| TFE3 | P19532 | BTBD7-201 | ENST00000298896 | 2621 nt | TSL 1 (best) BASIC | 24.77 | ■■□□□ 1.56 | | |
| TFE3 | P19532 | YWHAH-202 | ENST00000397492 | 1879 nt | TSL 3 BASIC | 24.77 | ■■□□□ 1.56 | | |
| TFE3 | P19532 | FAM124A-201 | ENST00000280057 | 2104 nt | TSL 2 BASIC | 24.76 | ■■□□□ 1.55 | | |
| TFE3 | P19532 | QDPR-208 | ENST00000513615 | 1188 nt | TSL 2 BASIC | 24.76 | ■■□□□ 1.55 | | |
| TFE3 | P19532 | AC139795.1-203 | ENST00000515045 | 853 nt | TSL 2 BASIC | 24.76 | ■■□□□ 1.55 | | |
| TFE3 | P19532 | HNRNPUL1-221 | ENST00000617305 | 1018 nt | TSL 1 (best) BASIC | 24.76 | ■■□□□ 1.55 | | |
| TFE3 | P19532 | MBOAT7-201 | ENST00000245615 | 2529 nt | APPRIS P1 TSL 1 (best) BASIC | 24.76 | ■■□□□ 1.55 | | |
| TFE3 | P19532 | LYL1-201 | ENST00000264824 | 1490 nt | APPRIS P1 TSL 1 (best) BASIC | 24.76 | ■■□□□ 1.55 | | |
| TFE3 | P19532 | SMOX-203 | ENST00000339123 | 2074 nt | TSL 1 (best) BASIC | 24.76 | ■■□□□ 1.55 | | |
| TFE3 | P19532 | AMIGO1-201 | ENST00000369862 | 2229 nt | APPRIS P1 TSL 5 BASIC | 24.76 | ■■□□□ 1.55 | | |
| TFE3 | P19532 | GNB2-203 | ENST00000393926 | 1641 nt | APPRIS P1 TSL 5 BASIC | 24.75 | ■■□□□ 1.55 | | |
| TFE3 | P19532 | CAPZB-203 | ENST00000375142 | 1686 nt | APPRIS ALT1 TSL 5 BASIC | 24.75 | ■■□□□ 1.55 | | |
| TFE3 | P19532 | ZNF365-206 | ENST00000395255 | 1674 nt | TSL 1 (best) BASIC | 24.75 | ■■□□□ 1.55 | | |
| TFE3 | P19532 | RNF166-201 | ENST00000312838 | 1883 nt | APPRIS P1 TSL 1 (best) BASIC | 24.75 | ■■□□□ 1.55 | | |
| TFE3 | P19532 | ENHO-201 | ENST00000399775 | 1082 nt | APPRIS P1 TSL 2 BASIC | 24.75 | ■■□□□ 1.55 | | |
| TFE3 | P19532 | AC064853.2-201 | ENST00000641246 | 144 nt | APPRIS P1 BASIC | 24.75 | ■■□□□ 1.55 | | |
| TFE3 | P19532 | DYRK2-203 | ENST00000393555 | 2209 nt | APPRIS ALT1 TSL 1 (best) BASIC | 24.75 | ■■□□□ 1.55 | | |
| TFE3 | P19532 | CENPVL1-201 | ENST00000602548 | 1620 nt | APPRIS P1 BASIC | 24.75 | ■■□□□ 1.55 | | |
| TFE3 | P19532 | CENPVL2-201 | ENST00000634648 | 1620 nt | APPRIS P1 BASIC | 24.75 | ■■□□□ 1.55 | | |
| TFE3 | P19532 | FAM118A-205 | ENST00000441876 | 1776 nt | APPRIS P1 TSL 1 (best) BASIC | 24.75 | ■■□□□ 1.55 | | |
| TFE3 | P19532 | GTPBP3-203 | ENST00000361619 | 1894 nt | TSL 2 BASIC | 24.75 | ■■□□□ 1.55 | | |
| TFE3 | P19532 | GTF2IP1-204 | ENST00000616377 | 2632 nt | TSL 2 BASIC | 24.74 | ■■□□□ 1.55 | | |
| TFE3 | P19532 | KRT18P10-201 | ENST00000388836 | 1287 nt | BASIC | 24.74 | ■■□□□ 1.55 | | |
| TFE3 | P19532 | ILDR2-208 | ENST00000529387 | 1238 nt | TSL 5 BASIC | 24.74 | ■■□□□ 1.55 | | |
| TFE3 | P19532 | FGF22-202 | ENST00000586042 | 1288 nt | TSL 1 (best) BASIC | 24.74 | ■■□□□ 1.55 | | |
| TFE3 | P19532 | ZFAND2B-201 | ENST00000289528 | 1314 nt | APPRIS P1 TSL 1 (best) BASIC | 24.74 | ■■□□□ 1.55 | | |
| TFE3 | P19532 | MPST-203 | ENST00000401419 | 1345 nt | APPRIS P1 TSL 1 (best) BASIC | 24.74 | ■■□□□ 1.55 | | |
| TFE3 | P19532 | MTERF3-201 | ENST00000287025 | 1409 nt | APPRIS P1 TSL 1 (best) BASIC | 24.74 | ■■□□□ 1.55 | | |
| TFE3 | P19532 | RING1-201 | ENST00000374656 | 1752 nt | APPRIS P1 TSL 1 (best) BASIC | 24.74 | ■■□□□ 1.55 | | |
| TFE3 | P19532 | TMEM221-201 | ENST00000341130 | 1930 nt | APPRIS P1 TSL 2 BASIC | 24.74 | ■■□□□ 1.55 | | |
| TFE3 | P19532 | FUT11-202 | ENST00000394790 | 2175 nt | TSL 1 (best) BASIC | 24.74 | ■■□□□ 1.55 | | |
| TFE3 | P19532 | BIN1-206 | ENST00000352848 | 2209 nt | TSL 1 (best) BASIC | 24.74 | ■■□□□ 1.55 | | |
| TFE3 | P19532 | FAM220A-206 | ENST00000616824 | 2211 nt | TSL 1 (best) BASIC | 24.73 | ■■□□□ 1.55 | | |
| TFE3 | P19532 | PFDN2-201 | ENST00000368010 | 677 nt | APPRIS P1 TSL 1 (best) BASIC | 24.73 | ■■□□□ 1.55 | | |
| TFE3 | P19532 | PVT1_1.1-201 | ENST00000615125 | 194 nt | BASIC | 24.73 | ■■□□□ 1.55 | | |
| TFE3 | P19532 | SRPK3-205 | ENST00000393786 | 1900 nt | APPRIS ALT2 TSL 1 (best) BASIC | 24.73 | ■■□□□ 1.55 | | |
| TFE3 | P19532 | SKOR2-203 | ENST00000620245 | 3048 nt | APPRIS ALT2 TSL 5 BASIC | 24.72 | ■■□□□ 1.55 | | |
| TFE3 | P19532 | SLC35A2-209 | ENST00000452555 | 1563 nt | TSL 2 BASIC | 24.72 | ■■□□□ 1.55 | | |
| TFE3 | P19532 | FBXW5-201 | ENST00000325285 | 2274 nt | APPRIS P1 TSL 1 (best) BASIC | 24.72 | ■■□□□ 1.55 | | |
| TFE3 | P19532 | CDC16-204 | ENST00000360383 | 2211 nt | APPRIS P3 TSL 5 BASIC | 24.72 | ■■□□□ 1.55 | | |
| TFE3 | P19532 | AC022211.4-201 | ENST00000625094 | 2161 nt | BASIC | 24.72 | ■■□□□ 1.55 | | |
| TFE3 | P19532 | FGD5-AS1-204 | ENST00000430166 | 1184 nt | TSL 2 BASIC | 24.72 | ■■□□□ 1.55 | | |
| TFE3 | P19532 | AL354928.1-201 | ENST00000438380 | 617 nt | TSL 2 BASIC | 24.72 | ■■□□□ 1.55 | | |
| TFE3 | P19532 | GUCD1-207 | ENST00000447813 | 895 nt | TSL 3 BASIC | 24.72 | ■■□□□ 1.55 | | |
| TFE3 | P19532 | ACOT1-202 | ENST00000557556 | 1271 nt | TSL 1 (best) BASIC | 24.72 | ■■□□□ 1.55 | | |
| TFE3 | P19532 | C8orf58-201 | ENST00000289989 | 2016 nt | APPRIS P3 TSL 5 BASIC | 24.72 | ■■□□□ 1.55 | | |