Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 GUK1-205ENST00000366722 850 ntTSL 3 BASIC29.72■■■□□ 2.35
COL11A2P13942 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
COL11A2P13942 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
COL11A2P13942 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC29.71■■■□□ 2.35
COL11A2P13942 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
COL11A2P13942 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
COL11A2P13942 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC29.71■■■□□ 2.35
COL11A2P13942 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC29.71■■■□□ 2.35
COL11A2P13942 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
COL11A2P13942 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.34
COL11A2P13942 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC29.69■■■□□ 2.34
COL11A2P13942 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC29.69■■■□□ 2.34
COL11A2P13942 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
COL11A2P13942 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC29.68■■■□□ 2.34
COL11A2P13942 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
COL11A2P13942 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC29.68■■■□□ 2.34
COL11A2P13942 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
COL11A2P13942 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
COL11A2P13942 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
COL11A2P13942 ZNRF2P3-201ENST00000424200 374 ntBASIC29.67■■■□□ 2.34
COL11A2P13942 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC29.67■■■□□ 2.34
COL11A2P13942 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC29.66■■■□□ 2.34
COL11A2P13942 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
COL11A2P13942 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
COL11A2P13942 CD72-202ENST00000378430 585 ntTSL 3 BASIC29.65■■■□□ 2.34
COL11A2P13942 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC29.65■■■□□ 2.34
COL11A2P13942 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
COL11A2P13942 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
COL11A2P13942 GAK-223ENST00000628912 497 ntTSL 5 BASIC29.64■■■□□ 2.34
COL11A2P13942 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
COL11A2P13942 AF131216.4-201ENST00000638924 1588 ntBASIC29.64■■■□□ 2.33
COL11A2P13942 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC29.63■■■□□ 2.33
COL11A2P13942 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC29.63■■■□□ 2.33
COL11A2P13942 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC29.63■■■□□ 2.33
COL11A2P13942 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
COL11A2P13942 AK3-203ENST00000447596 705 ntTSL 2 BASIC29.62■■■□□ 2.33
COL11A2P13942 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
COL11A2P13942 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
COL11A2P13942 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC29.62■■■□□ 2.33
COL11A2P13942 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC29.62■■■□□ 2.33
COL11A2P13942 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC29.62■■■□□ 2.33
COL11A2P13942 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC29.62■■■□□ 2.33
COL11A2P13942 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC29.62■■■□□ 2.33
COL11A2P13942 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC29.62■■■□□ 2.33
COL11A2P13942 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC29.62■■■□□ 2.33
COL11A2P13942 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC29.61■■■□□ 2.33
COL11A2P13942 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
COL11A2P13942 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC29.61■■■□□ 2.33
COL11A2P13942 AL356740.2-201ENST00000601559 647 ntBASIC29.61■■■□□ 2.33
COL11A2P13942 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC29.61■■■□□ 2.33
COL11A2P13942 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC29.61■■■□□ 2.33
COL11A2P13942 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC29.61■■■□□ 2.33
COL11A2P13942 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC29.6■■■□□ 2.33
COL11A2P13942 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
COL11A2P13942 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC29.6■■■□□ 2.33
COL11A2P13942 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC29.6■■■□□ 2.33
COL11A2P13942 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
COL11A2P13942 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
COL11A2P13942 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
COL11A2P13942 AC005837.3-201ENST00000612163 286 ntBASIC29.59■■■□□ 2.33
COL11A2P13942 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC29.59■■■□□ 2.33
COL11A2P13942 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
COL11A2P13942 TK2-202ENST00000417693 1046 ntTSL 2 BASIC29.59■■■□□ 2.33
COL11A2P13942 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
COL11A2P13942 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
COL11A2P13942 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC29.58■■■□□ 2.33
COL11A2P13942 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
COL11A2P13942 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
COL11A2P13942 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC29.58■■■□□ 2.33
COL11A2P13942 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
COL11A2P13942 SNAI3-AS1-204ENST00000567997 2048 ntBASIC29.57■■■□□ 2.32
COL11A2P13942 TFPT-201ENST00000391757 774 ntTSL 5 BASIC29.57■■■□□ 2.32
COL11A2P13942 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC29.57■■■□□ 2.32
COL11A2P13942 AC133561.4-201ENST00000566112 224 ntBASIC29.57■■■□□ 2.32
COL11A2P13942 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC29.56■■■□□ 2.32
COL11A2P13942 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC29.56■■■□□ 2.32
COL11A2P13942 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC29.56■■■□□ 2.32
COL11A2P13942 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
COL11A2P13942 AC026271.2-201ENST00000428091 497 ntBASIC29.55■■■□□ 2.32
COL11A2P13942 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC29.55■■■□□ 2.32
COL11A2P13942 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC29.55■■■□□ 2.32
COL11A2P13942 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC29.55■■■□□ 2.32
COL11A2P13942 CLTA-210ENST00000540080 989 ntTSL 2 BASIC29.55■■■□□ 2.32
COL11A2P13942 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
COL11A2P13942 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC29.54■■■□□ 2.32
COL11A2P13942 SNX5-217ENST00000606557 1087 ntBASIC29.54■■■□□ 2.32
COL11A2P13942 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC29.54■■■□□ 2.32
COL11A2P13942 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC29.54■■■□□ 2.32
COL11A2P13942 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC29.54■■■□□ 2.32
COL11A2P13942 AL031432.3-201ENST00000607698 485 ntBASIC29.54■■■□□ 2.32
COL11A2P13942 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
COL11A2P13942 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
COL11A2P13942 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC29.53■■■□□ 2.32
COL11A2P13942 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
COL11A2P13942 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC29.52■■■□□ 2.32
COL11A2P13942 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC29.52■■■□□ 2.32
COL11A2P13942 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC29.52■■■□□ 2.32
COL11A2P13942 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
COL11A2P13942 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC29.51■■■□□ 2.32
COL11A2P13942 SUDS3P1-201ENST00000505831 966 ntBASIC29.51■■■□□ 2.32
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms