Protein–RNA interactions for Protein: P12956

XRCC6, X-ray repair cross-complementing protein 6, humanhuman

Known RBP eCLIP

Length 609 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC6P12956 KMT2A-209ENST00000531904 4320 ntTSL 222.87■■□□□ 1.251e-10■■■■□ 22.5
XRCC6P12956 KMT2A-206ENST00000527869 481 ntTSL 319.98■□□□□ 0.791e-10■■■■□ 22.5
XRCC6P12956 KMT2A-211ENST00000533790 804 ntTSL 219.98■□□□□ 0.791e-10■■■■□ 22.5
XRCC6P12956 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC23.36■■□□□ 1.337e-6■■■■□ 22.4
XRCC6P12956 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.37e-6■■■■□ 22.4
XRCC6P12956 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC16.05■□□□□ 0.167e-6■■■■□ 22.4
XRCC6P12956 DHPS-218ENST00000600510 1085 ntTSL 215.77■□□□□ 0.127e-6■■■■□ 22.4
XRCC6P12956 DHPS-214ENST00000598246 553 ntTSL 314.25□□□□□ -0.137e-6■■■■□ 22.4
XRCC6P12956 DHPS-202ENST00000351660 1090 ntTSL 1 (best) BASIC13.12□□□□□ -0.317e-6■■■■□ 22.4
XRCC6P12956 DHPS-221ENST00000601537 1176 ntTSL 1 (best)12.26□□□□□ -0.457e-6■■■■□ 22.4
XRCC6P12956 DHPS-220ENST00000600864 464 ntTSL 511.39□□□□□ -0.597e-6■■■■□ 22.4
XRCC6P12956 DHPS-222ENST00000601639 1133 ntTSL 510.97□□□□□ -0.657e-6■■■■□ 22.4
XRCC6P12956 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.981e-6■■■■□ 22.3
XRCC6P12956 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.881e-6■■■■□ 22.3
XRCC6P12956 CXXC1-214ENST00000590901 2562 ntTSL 219.58■□□□□ 0.721e-6■■■■□ 22.3
XRCC6P12956 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC19.43■□□□□ 0.71e-6■■■■□ 22.3
XRCC6P12956 CXXC1-205ENST00000586502 541 ntTSL 318.42■□□□□ 0.541e-6■■■■□ 22.3
XRCC6P12956 CXXC1-203ENST00000586144 474 ntTSL 216.49■□□□□ 0.231e-6■■■■□ 22.3
XRCC6P12956 CXXC1-206ENST00000586568 866 ntTSL 216.34■□□□□ 0.211e-6■■■■□ 22.3
XRCC6P12956 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC21.5■■□□□ 1.035e-8■■■■□ 22.3
XRCC6P12956 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC17.7■□□□□ 0.425e-8■■■■□ 22.3
XRCC6P12956 FARP1-201ENST00000319562 10262 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.225e-8■■■■□ 22.3
XRCC6P12956 FARP1-219ENST00000596580 13532 ntTSL 5 BASIC8.91□□□□□ -0.985e-8■■■■□ 22.3
XRCC6P12956 DYRK1A-207ENST00000462274 1189 ntTSL 1 (best)28.33■■■□□ 2.131e-8■■■■□ 22.2
XRCC6P12956 DYRK1A-201ENST00000338785 5498 ntTSL 1 (best) BASIC8.36□□□□□ -1.071e-8■■■■□ 22.2
XRCC6P12956 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.076e-19■■■■□ 22.1
XRCC6P12956 COL22A1-203ENST00000435777 4355 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.016e-19■■■■□ 22.1
XRCC6P12956 ADAM9-201ENST00000379917 3836 ntTSL 1 (best)12.78□□□□□ -0.361e-6■■■■□ 22.1
XRCC6P12956 ADAM9-209ENST00000487273 3839 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.391e-6■■■■□ 22.1
XRCC6P12956 ADAM9-204ENST00000468065 3755 ntTSL 1 (best)11.86□□□□□ -0.511e-6■■■■□ 22.1
XRCC6P12956 ADAM9-207ENST00000481873 3793 ntTSL 1 (best)11.81□□□□□ -0.521e-6■■■■□ 22.1
XRCC6P12956 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC24.95■■□□□ 1.581e-9■■■■□ 22.1
XRCC6P12956 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.51e-9■■■■□ 22.1
XRCC6P12956 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC24.19■■□□□ 1.461e-9■■■■□ 22.1
XRCC6P12956 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.451e-9■■■■□ 22.1
XRCC6P12956 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.451e-9■■■■□ 22.1
XRCC6P12956 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.411e-9■■■■□ 22.1
XRCC6P12956 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.351e-9■■■■□ 22.1
XRCC6P12956 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC23.31■■□□□ 1.321e-9■■■■□ 22.1
XRCC6P12956 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.281e-9■■■■□ 22.1
XRCC6P12956 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC22.35■■□□□ 1.171e-9■■■■□ 22.1
XRCC6P12956 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC21.83■■□□□ 1.081e-9■■■■□ 22.1
XRCC6P12956 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC21.67■■□□□ 1.061e-9■■■■□ 22.1
XRCC6P12956 MRPL45P2-201ENST00000425159 927 ntTSL 1 (best) BASIC12.41□□□□□ -0.421e-9■■■■□ 22.1
XRCC6P12956 MRPL45P2-202ENST00000572695 804 ntTSL 39.05□□□□□ -0.961e-9■■■■□ 22.1
XRCC6P12956 MRPL45P2-204ENST00000575291 1765 ntTSL 1 (best)9.01□□□□□ -0.971e-9■■■■□ 22.1
XRCC6P12956 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC18.91■□□□□ 0.621e-7■■■■□ 22
XRCC6P12956 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC17.55■□□□□ 0.41e-7■■■■□ 22
XRCC6P12956 MBNL1-207ENST00000459747 594 ntTSL 417.2■□□□□ 0.341e-7■■■■□ 22
XRCC6P12956 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.21e-7■■■■□ 22
XRCC6P12956 MBNL1-209ENST00000460591 898 ntTSL 310.06□□□□□ -0.81e-7■■■■□ 22
XRCC6P12956 MBNL1-221ENST00000495875 545 ntTSL 29.76□□□□□ -0.851e-7■■■■□ 22
XRCC6P12956 MBNL1-212ENST00000464596 989 ntTSL 59.67□□□□□ -0.861e-7■■■■□ 22
XRCC6P12956 MBNL1-213ENST00000465907 945 ntTSL 1 (best) BASIC7.99□□□□□ -1.131e-7■■■■□ 22
XRCC6P12956 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC7.54□□□□□ -1.21e-7■■■■□ 22
XRCC6P12956 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC7.34□□□□□ -1.231e-7■■■■□ 22
XRCC6P12956 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC7.34□□□□□ -1.231e-7■■■■□ 22
XRCC6P12956 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC6.05□□□□□ -1.441e-7■■■■□ 22
XRCC6P12956 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC5.02□□□□□ -1.611e-7■■■■□ 22
XRCC6P12956 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC4.6□□□□□ -1.671e-7■■■■□ 22
XRCC6P12956 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC4.35□□□□□ -1.711e-7■■■■□ 22
XRCC6P12956 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.33□□□□□ -1.721e-7■■■■□ 22
XRCC6P12956 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.87□□□□□ -1.791e-7■■■■□ 22
XRCC6P12956 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.78□□□□□ -1.81e-7■■■■□ 22
XRCC6P12956 RPS3-213ENST00000529285 550 ntTSL 522.95■■□□□ 1.263e-12■■■■□ 22
XRCC6P12956 RPS3-212ENST00000529173 1373 ntTSL 515.55■□□□□ 0.083e-12■■■■□ 22
XRCC6P12956 RPS3-203ENST00000524851 866 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.693e-12■■■■□ 22
XRCC6P12956 RPS3-207ENST00000526608 710 ntTSL 5 BASIC9.94□□□□□ -0.823e-12■■■■□ 22
XRCC6P12956 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC34.59■■■■□ 3.132e-7■■■■□ 22
XRCC6P12956 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC27.03■■□□□ 1.922e-7■■■■□ 22
XRCC6P12956 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.262e-7■■■■□ 22
XRCC6P12956 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC22.33■■□□□ 1.162e-7■■■■□ 22
XRCC6P12956 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC21.01■□□□□ 0.952e-7■■■■□ 22
XRCC6P12956 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC20.09■□□□□ 0.812e-7■■■■□ 22
XRCC6P12956 NBEAL2-201ENST00000416683 6364 ntTSL 1 (best)18.48■□□□□ 0.552e-7■■■■□ 22
XRCC6P12956 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.332e-7■■■■□ 22
XRCC6P12956 NDUFA10-201ENST00000252711 4915 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 02e-7■■■■□ 22
XRCC6P12956 NDUFA10-212ENST00000485344 4509 ntTSL 214.65□□□□□ -0.062e-7■■■■□ 22
XRCC6P12956 NDUFA10-207ENST00000443626 776 ntTSL 513.73□□□□□ -0.212e-7■■■■□ 22
XRCC6P12956 NDUFA10-206ENST00000419408 662 ntTSL 512.25□□□□□ -0.452e-7■■■■□ 22
XRCC6P12956 ANKRD20A11P-206ENST00000451663 3717 ntBASIC11.8□□□□□ -0.522e-7■■■■□ 22
XRCC6P12956 NDUFA10-211ENST00000476216 817 ntTSL 210.44□□□□□ -0.742e-7■■■■□ 22
XRCC6P12956 NDUFA10-208ENST00000444548 621 ntTSL 39.58□□□□□ -0.882e-7■■■■□ 22
XRCC6P12956 SLC25A28-204ENST00000496035 744 ntTSL 39.42□□□□□ -0.92e-7■■■■□ 22
XRCC6P12956 NDUFA10-209ENST00000448880 434 ntTSL 53.27□□□□□ -1.892e-7■■■■□ 22
XRCC6P12956 SEC24A-201ENST00000322887 2700 ntTSL 1 (best) BASIC15.53■□□□□ 0.089e-8■■■■□ 21.9
XRCC6P12956 SEC24A-202ENST00000398844 6299 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.689e-8■■■■□ 21.9
XRCC6P12956 SEC24A-203ENST00000513123 650 ntTSL 53.86□□□□□ -1.799e-8■■■■□ 21.9
XRCC6P12956 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC22.9■■□□□ 1.262e-6■■■■□ 21.9
XRCC6P12956 NAP1L4-220ENST00000532325 526 ntTSL 56.1□□□□□ -1.432e-6■■■■□ 21.9
XRCC6P12956 NAP1L4-204ENST00000448187 888 ntTSL 54.39□□□□□ -1.712e-6■■■■□ 21.9
XRCC6P12956 KDM5B-201ENST00000235790 4418 ntTSL 216.88■□□□□ 0.296e-7■■■■□ 21.9
XRCC6P12956 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC15.75■□□□□ 0.116e-7■■■■□ 21.9
XRCC6P12956 KDM5B-203ENST00000367265 10345 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.116e-7■■■■□ 21.9
XRCC6P12956 RPL5-202ENST00000370321 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.223e-6■■■■□ 21.9
XRCC6P12956 RPL5-205ENST00000497519 1210 ntTSL 29.91□□□□□ -0.823e-6■■■■□ 21.9
XRCC6P12956 KDM5B-210ENST00000602511 542 ntTSL 59.16□□□□□ -0.946e-7■■■■□ 21.9
XRCC6P12956 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC27.67■■■□□ 2.021e-8■■■■□ 21.8
XRCC6P12956 PDK1-205ENST00000431718 728 ntTSL 323.4■■□□□ 1.341e-8■■■■□ 21.8
XRCC6P12956 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.951e-8■■■■□ 21.8
Retrieved 100 of 6,788 protein–RNA pairs in 158.6 ms