RNA–Protein interactions for RNA: ENST00000513123.1

SEC24A-203, Transcript of SEC24 homolog A, COPII coat complex component, humanhuman

TSL 5

Gene SEC24A, Length 650 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24A-203ENST00000513123 AEBP2Q6ZN18 517 aaPredicted RBP25.38■■□□□ 1.65
SEC24A-203ENST00000513123 CHIC1Q5VXU3 224 aa23.89■■□□□ 1.41
SEC24A-203ENST00000513123 SENP3Q9H4L4 574 aaPredicted RBP21.69■■□□□ 1.06
SEC24A-203ENST00000513123 PHF23Q9BUL5 403 aaPredicted RBP21.36■■□□□ 1.01
SEC24A-203ENST00000513123 FOXD1Q16676 465 aa20.24■□□□□ 0.83
SEC24A-203ENST00000513123 MSH5O43196 834 aa19.03■□□□□ 0.64
SEC24A-203ENST00000513123 PLPPR3Q6T4P5 718 aa18.98■□□□□ 0.63
SEC24A-203ENST00000513123 POTEDQ86YR6 584 aa18.95■□□□□ 0.62
SEC24A-203ENST00000513123 PIAS4Q8N2W9 510 aaPredicted RBP18.84■□□□□ 0.61
SEC24A-203ENST00000513123 PPP6R1Q9UPN7 881 aa18.75■□□□□ 0.59
SEC24A-203ENST00000513123 ADRA2BP18089 450 aa18.66■□□□□ 0.58
SEC24A-203ENST00000513123 MAPK8IP2Q13387 824 aaPredicted RBP17.2■□□□□ 0.34
SEC24A-203ENST00000513123 DMRT2Q9Y5R5 561 aa17.17■□□□□ 0.34
SEC24A-203ENST00000513123 SCAF1Q9H7N4 1312 aaKnown RBP17.08■□□□□ 0.32
SEC24A-203ENST00000513123 PPP4R3CPQ6ZMV5 832 aa16.6■□□□□ 0.25
SEC24A-203ENST00000513123 HOXD11P31277 338 aaPredicted RBP16.46■□□□□ 0.23
SEC24A-203ENST00000513123 CACNB1Q02641 598 aaPredicted RBP16.44■□□□□ 0.22
SEC24A-203ENST00000513123 DCAF8L1A6NGE4 600 aa16.42■□□□□ 0.22
SEC24A-203ENST00000513123 CNKSR2Q8WXI2 1034 aa16.35■□□□□ 0.21
SEC24A-203ENST00000513123 RNF216Q9NWF9 866 aaPredicted RBP16.26■□□□□ 0.19
SEC24A-203ENST00000513123 RNF39Q9H2S5 420 aa16.22■□□□□ 0.19
SEC24A-203ENST00000513123 C1QBPQ07021 282 aaKnown RBP15.97■□□□□ 0.15
SEC24A-203ENST00000513123 DNAJC5BQ9UF47 199 aa15.96■□□□□ 0.15
SEC24A-203ENST00000513123 NCBP3Q53F19 620 aaKnown RBP15.89■□□□□ 0.13
SEC24A-203ENST00000513123 NPM3O75607 178 aaKnown RBP15.66■□□□□ 0.1
SEC24A-203ENST00000513123 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.64■□□□□ 0.09
SEC24A-203ENST00000513123 U3KPZ7 1027 aaPredicted RBP15.31■□□□□ 0.04
SEC24A-203ENST00000513123 KCNA4P22459 653 aa15.16■□□□□ 0.02
SEC24A-203ENST00000513123 SPINK5Q9NQ38 1064 aaPredicted RBP15.14■□□□□ 0.01
SEC24A-203ENST00000513123 CAPN15O75808 1086 aa15.11■□□□□ 0.01
SEC24A-203ENST00000513123 DSG3P32926 999 aa15.11■□□□□ 0.01
SEC24A-203ENST00000513123 SLC4A2P04920 1241 aa15.03■□□□□ -0
SEC24A-203ENST00000513123 APLP2Q06481 763 aa14.85□□□□□ -0.03
SEC24A-203ENST00000513123 TRHP20396 242 aaPredicted RBP14.81□□□□□ -0.04
SEC24A-203ENST00000513123 POTEHQ6S545 545 aa14.8□□□□□ -0.04
SEC24A-203ENST00000513123 ZNF219Q9P2Y4 722 aaPredicted RBP14.8□□□□□ -0.04
SEC24A-203ENST00000513123 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.79□□□□□ -0.04
SEC24A-203ENST00000513123 HNRNPUL2Q1KMD3 747 aaKnown RBP14.79□□□□□ -0.04
SEC24A-203ENST00000513123 ABCB7O75027 752 aa14.74□□□□□ -0.05
SEC24A-203ENST00000513123 SAMD1Q6SPF0 538 aaPredicted RBP14.7□□□□□ -0.06
SEC24A-203ENST00000513123 MYCNP04198 464 aaPredicted RBP14.5□□□□□ -0.09
SEC24A-203ENST00000513123 RBM42Q9BTD8 480 aaKnown RBP14.43□□□□□ -0.1
SEC24A-203ENST00000513123 POLA2Q14181 598 aa14.38□□□□□ -0.11
SEC24A-203ENST00000513123 SLC4A1APQ9BWU0 796 aaKnown RBP14.26□□□□□ -0.13
SEC24A-203ENST00000513123 FOXD4L1Q9NU39 408 aa14.23□□□□□ -0.13
SEC24A-203ENST00000513123 CHRDL2Q6WN34 429 aa14.19□□□□□ -0.14
SEC24A-203ENST00000513123 ATF5Q9Y2D1 282 aaPredicted RBP14.17□□□□□ -0.14
SEC24A-203ENST00000513123 ZBTB12Q9Y330 459 aaPredicted RBP14.09□□□□□ -0.15
SEC24A-203ENST00000513123 AKT1S1Q96B36 256 aa14.04□□□□□ -0.16
SEC24A-203ENST00000513123 ZBTB22O15209 634 aa13.94□□□□□ -0.18
SEC24A-203ENST00000513123 OSCARQ8IYS5 282 aa13.93□□□□□ -0.18
SEC24A-203ENST00000513123 REM2Q8IYK8 340 aaPredicted RBP13.91□□□□□ -0.18
SEC24A-203ENST00000513123 ATXN8OSP0DMR3 200 aa13.83□□□□□ -0.2
SEC24A-203ENST00000513123 PIP4P2Q8N4L2 257 aa13.8□□□□□ -0.2
SEC24A-203ENST00000513123 SP7Q8TDD2 431 aaPredicted RBP13.77□□□□□ -0.21
SEC24A-203ENST00000513123 PITPNM1O00562 1244 aa13.76□□□□□ -0.21
SEC24A-203ENST00000513123 FXR2P51116 673 aaKnown RBP eCLIP13.7□□□□□ -0.22
SEC24A-203ENST00000513123 SPDYE2BA6NHP3 402 aa13.64□□□□□ -0.23
SEC24A-203ENST00000513123 SPDYE6P0CI01 402 aa13.64□□□□□ -0.23
SEC24A-203ENST00000513123 SPDYE2Q495Y8 402 aa13.64□□□□□ -0.23
SEC24A-203ENST00000513123 FBLN2P98095 1184 aa13.63□□□□□ -0.23
SEC24A-203ENST00000513123 HAX1O00165 279 aa13.59□□□□□ -0.23
SEC24A-203ENST00000513123 MKRN4PQ13434 485 aaPredicted RBP13.52□□□□□ -0.25
SEC24A-203ENST00000513123 SPDYE1Q8NFV5 336 aaPredicted RBP13.44□□□□□ -0.26
SEC24A-203ENST00000513123 SSUH2Q9Y2M2 353 aa13.44□□□□□ -0.26
SEC24A-203ENST00000513123 EVX2Q03828 476 aa13.43□□□□□ -0.26
SEC24A-203ENST00000513123 ZNF692Q9BU19 519 aaPredicted RBP13.41□□□□□ -0.26
SEC24A-203ENST00000513123 CLEC11AQ9Y240 323 aa13.4□□□□□ -0.26
SEC24A-203ENST00000513123 PRKAR2AP13861 404 aaKnown RBP13.39□□□□□ -0.27
SEC24A-203ENST00000513123 C19orf67A6NJJ6 358 aa13.27□□□□□ -0.29
SEC24A-203ENST00000513123 PABPN1Q86U42 306 aaKnown RBP eCLIP13.22□□□□□ -0.29
SEC24A-203ENST00000513123 CHADLQ6NUI6 762 aa13.18□□□□□ -0.3
SEC24A-203ENST00000513123 PRR29P0C7W0 189 aa13.16□□□□□ -0.3
SEC24A-203ENST00000513123 GABBR2O75899 941 aa13.11□□□□□ -0.31
SEC24A-203ENST00000513123 CSRNP3Q8WYN3 585 aa13.09□□□□□ -0.31
SEC24A-203ENST00000513123 FARP1Q9Y4F1 1045 aaPredicted RBP12.99□□□□□ -0.33
SEC24A-203ENST00000513123 CD44P16070 742 aaKnown RBP12.96□□□□□ -0.33
SEC24A-203ENST00000513123 LHX8Q68G74 356 aa12.91□□□□□ -0.34
SEC24A-203ENST00000513123 CLCN6P51797 869 aa12.86□□□□□ -0.35
SEC24A-203ENST00000513123 POTEIP0CG38 1075 aa12.85□□□□□ -0.35
SEC24A-203ENST00000513123 STAG3Q9UJ98 1225 aa12.81□□□□□ -0.36
SEC24A-203ENST00000513123 CREBZFQ9NS37 354 aa12.8□□□□□ -0.36
SEC24A-203ENST00000513123 ZNF579Q8NAF0 562 aaKnown RBP12.77□□□□□ -0.37
SEC24A-203ENST00000513123 EHMT2Q96KQ7 1210 aa12.76□□□□□ -0.37
SEC24A-203ENST00000513123 SPDYE4A6NLX3 237 aa12.75□□□□□ -0.37
SEC24A-203ENST00000513123 ZRANB1Q9UGI0 708 aa12.73□□□□□ -0.37
SEC24A-203ENST00000513123 DCBLD2Q96PD2 775 aa12.69□□□□□ -0.38
SEC24A-203ENST00000513123 GALR2O43603 387 aaPredicted RBP12.61□□□□□ -0.39
SEC24A-203ENST00000513123 PAK3O75914 559 aaPredicted RBP12.57□□□□□ -0.4
SEC24A-203ENST00000513123 MNX1P50219 401 aaPredicted RBP12.57□□□□□ -0.4
SEC24A-203ENST00000513123 NPM1P06748 294 aaKnown RBP eCLIP12.55□□□□□ -0.4
SEC24A-203ENST00000513123 PHF12Q96QT6 1004 aa12.54□□□□□ -0.4
SEC24A-203ENST00000513123 PROM2Q8N271 834 aa12.45□□□□□ -0.42
SEC24A-203ENST00000513123 POTEB2H3BUK9 544 aa12.41□□□□□ -0.42
SEC24A-203ENST00000513123 OTUD5Q96G74 571 aa12.41□□□□□ -0.42
SEC24A-203ENST00000513123 PELP1Q8IZL8 1130 aaKnown RBP12.39□□□□□ -0.43
SEC24A-203ENST00000513123 MS4A3Q96HJ5 214 aa12.37□□□□□ -0.43
SEC24A-203ENST00000513123 ASTLQ6HA08 431 aaPredicted RBP12.35□□□□□ -0.43
SEC24A-203ENST00000513123 ATMINO43313 823 aaPredicted RBP12.31□□□□□ -0.44
SEC24A-203ENST00000513123 TSPYL2Q9H2G4 693 aaPredicted RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms