Protein–RNA interactions for Protein: P0DP02

IGHV3-30-3, Immunoglobulin heavy variable 3-30-3, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-30-3P0DP02 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
IGHV3-30-3P0DP02 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
IGHV3-30-3P0DP02 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
IGHV3-30-3P0DP02 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC16.67■□□□□ 0.26
IGHV3-30-3P0DP02 SMPD5-203ENST00000639008 1464 ntBASIC16.67■□□□□ 0.26
IGHV3-30-3P0DP02 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
IGHV3-30-3P0DP02 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC16.66■□□□□ 0.26
IGHV3-30-3P0DP02 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC16.66■□□□□ 0.26
IGHV3-30-3P0DP02 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
IGHV3-30-3P0DP02 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
IGHV3-30-3P0DP02 AC010501.1-201ENST00000606270 1962 ntBASIC16.66■□□□□ 0.26
IGHV3-30-3P0DP02 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
IGHV3-30-3P0DP02 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
IGHV3-30-3P0DP02 ECEL1P2-201ENST00000461596 1295 ntBASIC16.66■□□□□ 0.26
IGHV3-30-3P0DP02 REST-210ENST00000638187 1334 ntTSL 5 BASIC16.66■□□□□ 0.26
IGHV3-30-3P0DP02 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC16.65■□□□□ 0.26
IGHV3-30-3P0DP02 AC138932.3-201ENST00000567634 1902 ntBASIC16.65■□□□□ 0.26
IGHV3-30-3P0DP02 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
IGHV3-30-3P0DP02 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
IGHV3-30-3P0DP02 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC16.65■□□□□ 0.26
IGHV3-30-3P0DP02 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
IGHV3-30-3P0DP02 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
IGHV3-30-3P0DP02 AC022211.4-201ENST00000625094 2161 ntBASIC16.65■□□□□ 0.26
IGHV3-30-3P0DP02 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
IGHV3-30-3P0DP02 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC16.64■□□□□ 0.25
IGHV3-30-3P0DP02 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
IGHV3-30-3P0DP02 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
IGHV3-30-3P0DP02 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
IGHV3-30-3P0DP02 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
IGHV3-30-3P0DP02 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC16.64■□□□□ 0.25
IGHV3-30-3P0DP02 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
IGHV3-30-3P0DP02 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
IGHV3-30-3P0DP02 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
IGHV3-30-3P0DP02 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
IGHV3-30-3P0DP02 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
IGHV3-30-3P0DP02 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
IGHV3-30-3P0DP02 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
IGHV3-30-3P0DP02 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
IGHV3-30-3P0DP02 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
IGHV3-30-3P0DP02 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
IGHV3-30-3P0DP02 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
IGHV3-30-3P0DP02 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
IGHV3-30-3P0DP02 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
IGHV3-30-3P0DP02 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
IGHV3-30-3P0DP02 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
IGHV3-30-3P0DP02 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC16.62■□□□□ 0.25
IGHV3-30-3P0DP02 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
IGHV3-30-3P0DP02 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
IGHV3-30-3P0DP02 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
IGHV3-30-3P0DP02 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
IGHV3-30-3P0DP02 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
IGHV3-30-3P0DP02 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
IGHV3-30-3P0DP02 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
IGHV3-30-3P0DP02 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
IGHV3-30-3P0DP02 RNF126P1-201ENST00000567452 1320 ntBASIC16.62■□□□□ 0.25
IGHV3-30-3P0DP02 AC012676.1-201ENST00000574705 1949 ntBASIC16.62■□□□□ 0.25
IGHV3-30-3P0DP02 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC16.62■□□□□ 0.25
IGHV3-30-3P0DP02 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
IGHV3-30-3P0DP02 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
IGHV3-30-3P0DP02 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
IGHV3-30-3P0DP02 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
IGHV3-30-3P0DP02 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
IGHV3-30-3P0DP02 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
IGHV3-30-3P0DP02 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
IGHV3-30-3P0DP02 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
IGHV3-30-3P0DP02 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC16.61■□□□□ 0.25
IGHV3-30-3P0DP02 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
IGHV3-30-3P0DP02 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
IGHV3-30-3P0DP02 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
IGHV3-30-3P0DP02 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC16.6■□□□□ 0.25
IGHV3-30-3P0DP02 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC16.6■□□□□ 0.25
IGHV3-30-3P0DP02 MIR3960-201ENST00000583311 91 ntBASIC16.6■□□□□ 0.25
IGHV3-30-3P0DP02 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC16.6■□□□□ 0.25
IGHV3-30-3P0DP02 BRD4-212ENST00000630599 726 ntTSL 2 BASIC16.6■□□□□ 0.25
IGHV3-30-3P0DP02 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
IGHV3-30-3P0DP02 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
IGHV3-30-3P0DP02 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
IGHV3-30-3P0DP02 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
IGHV3-30-3P0DP02 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
IGHV3-30-3P0DP02 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC16.6■□□□□ 0.25
IGHV3-30-3P0DP02 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
IGHV3-30-3P0DP02 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
IGHV3-30-3P0DP02 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
IGHV3-30-3P0DP02 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
IGHV3-30-3P0DP02 AC025884.2-201ENST00000553429 711 ntBASIC16.59■□□□□ 0.25
IGHV3-30-3P0DP02 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
IGHV3-30-3P0DP02 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC16.59■□□□□ 0.25
IGHV3-30-3P0DP02 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
IGHV3-30-3P0DP02 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC16.58■□□□□ 0.24
IGHV3-30-3P0DP02 PFN2-211ENST00000489155 636 ntTSL 4 BASIC16.58■□□□□ 0.24
IGHV3-30-3P0DP02 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
IGHV3-30-3P0DP02 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
IGHV3-30-3P0DP02 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC16.58■□□□□ 0.24
IGHV3-30-3P0DP02 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
IGHV3-30-3P0DP02 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
IGHV3-30-3P0DP02 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
IGHV3-30-3P0DP02 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
IGHV3-30-3P0DP02 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
IGHV3-30-3P0DP02 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
IGHV3-30-3P0DP02 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms