Protein–RNA interactions for Protein: P08294

SOD3, Extracellular superoxide dismutase [Cu-Zn], humanhuman

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOD3P08294 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
SOD3P08294 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC20.45■□□□□ 0.86
SOD3P08294 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC20.45■□□□□ 0.86
SOD3P08294 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SOD3P08294 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SOD3P08294 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
SOD3P08294 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
SOD3P08294 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
SOD3P08294 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC20.45■□□□□ 0.86
SOD3P08294 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC20.45■□□□□ 0.86
SOD3P08294 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
SOD3P08294 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC20.45■□□□□ 0.86
SOD3P08294 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SOD3P08294 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SOD3P08294 KRT18P24-201ENST00000344739 1156 ntBASIC20.44■□□□□ 0.86
SOD3P08294 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SOD3P08294 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SOD3P08294 KRT125P-201ENST00000546827 989 ntBASIC20.44■□□□□ 0.86
SOD3P08294 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC20.44■□□□□ 0.86
SOD3P08294 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC20.44■□□□□ 0.86
SOD3P08294 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SOD3P08294 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC20.44■□□□□ 0.86
SOD3P08294 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SOD3P08294 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SOD3P08294 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SOD3P08294 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SOD3P08294 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
SOD3P08294 BX664725.1-201ENST00000438252 379 ntBASIC20.43■□□□□ 0.86
SOD3P08294 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC20.43■□□□□ 0.86
SOD3P08294 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SOD3P08294 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
SOD3P08294 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SOD3P08294 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SOD3P08294 MIR4787-201ENST00000607364 84 ntBASIC20.42■□□□□ 0.86
SOD3P08294 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
SOD3P08294 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC20.42■□□□□ 0.86
SOD3P08294 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SOD3P08294 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SOD3P08294 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
SOD3P08294 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
SOD3P08294 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SOD3P08294 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SOD3P08294 SHF-208ENST00000560734 1731 ntTSL 3 BASIC20.41■□□□□ 0.86
SOD3P08294 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
SOD3P08294 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC20.41■□□□□ 0.86
SOD3P08294 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SOD3P08294 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SOD3P08294 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SOD3P08294 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SOD3P08294 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.4■□□□□ 0.86
SOD3P08294 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
SOD3P08294 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC20.4■□□□□ 0.86
SOD3P08294 AC120024.1-201ENST00000562672 995 ntBASIC20.4■□□□□ 0.86
SOD3P08294 GRAMD4P7-201ENST00000578182 1232 ntBASIC20.4■□□□□ 0.86
SOD3P08294 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC20.4■□□□□ 0.86
SOD3P08294 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SOD3P08294 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SOD3P08294 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SOD3P08294 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SOD3P08294 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SOD3P08294 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SOD3P08294 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
SOD3P08294 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SOD3P08294 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC20.39■□□□□ 0.85
SOD3P08294 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
SOD3P08294 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
SOD3P08294 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC20.38■□□□□ 0.85
SOD3P08294 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC20.38■□□□□ 0.85
SOD3P08294 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SOD3P08294 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SOD3P08294 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SOD3P08294 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC20.38■□□□□ 0.85
SOD3P08294 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SOD3P08294 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
SOD3P08294 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SOD3P08294 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SOD3P08294 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC20.37■□□□□ 0.85
SOD3P08294 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SOD3P08294 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SOD3P08294 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC20.37■□□□□ 0.85
SOD3P08294 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SOD3P08294 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SOD3P08294 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SOD3P08294 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SOD3P08294 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC20.37■□□□□ 0.85
SOD3P08294 PKM-203ENST00000389093 2279 ntTSL 5 BASIC20.37■□□□□ 0.85
SOD3P08294 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SOD3P08294 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SOD3P08294 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC20.36■□□□□ 0.85
SOD3P08294 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
SOD3P08294 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC20.36■□□□□ 0.85
SOD3P08294 UNC93B8-201ENST00000511903 705 ntBASIC20.36■□□□□ 0.85
SOD3P08294 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC20.36■□□□□ 0.85
SOD3P08294 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC20.36■□□□□ 0.85
SOD3P08294 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC20.36■□□□□ 0.85
SOD3P08294 AC137630.3-201ENST00000607245 391 ntBASIC20.36■□□□□ 0.85
SOD3P08294 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC20.36■□□□□ 0.85
SOD3P08294 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC20.36■□□□□ 0.85
SOD3P08294 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SOD3P08294 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms