Protein–RNA interactions for Protein: P04435

TCRB, T-cell receptor beta chain V region CTL-L17, humanhuman

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBP04435 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TCRBP04435 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC20.17■□□□□ 0.82
TCRBP04435 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.17■□□□□ 0.82
TCRBP04435 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TCRBP04435 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
TCRBP04435 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC20.17■□□□□ 0.82
TCRBP04435 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
TCRBP04435 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TCRBP04435 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC20.17■□□□□ 0.82
TCRBP04435 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC20.17■□□□□ 0.82
TCRBP04435 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
TCRBP04435 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
TCRBP04435 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
TCRBP04435 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
TCRBP04435 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
TCRBP04435 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
TCRBP04435 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC20.16■□□□□ 0.82
TCRBP04435 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
TCRBP04435 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TCRBP04435 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TCRBP04435 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
TCRBP04435 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
TCRBP04435 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TCRBP04435 ABCB10P4-201ENST00000566803 2184 ntBASIC20.15■□□□□ 0.82
TCRBP04435 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TCRBP04435 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TCRBP04435 AL391121.1-201ENST00000607967 1349 ntBASIC20.15■□□□□ 0.82
TCRBP04435 SLC6A10P-202ENST00000431994 2058 ntBASIC20.15■□□□□ 0.82
TCRBP04435 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TCRBP04435 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.14■□□□□ 0.82
TCRBP04435 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
TCRBP04435 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.82
TCRBP04435 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC20.14■□□□□ 0.81
TCRBP04435 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
TCRBP04435 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TCRBP04435 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
TCRBP04435 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC20.14■□□□□ 0.81
TCRBP04435 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
TCRBP04435 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TCRBP04435 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TCRBP04435 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TCRBP04435 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
TCRBP04435 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.13■□□□□ 0.81
TCRBP04435 PEX7-203ENST00000541292 945 ntTSL 5 BASIC20.13■□□□□ 0.81
TCRBP04435 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TCRBP04435 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.13■□□□□ 0.81
TCRBP04435 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TCRBP04435 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.12■□□□□ 0.81
TCRBP04435 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.12■□□□□ 0.81
TCRBP04435 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TCRBP04435 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
TCRBP04435 LINC00565-201ENST00000562710 2331 ntBASIC20.12■□□□□ 0.81
TCRBP04435 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
TCRBP04435 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC20.12■□□□□ 0.81
TCRBP04435 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
TCRBP04435 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TCRBP04435 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TCRBP04435 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TCRBP04435 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC20.11■□□□□ 0.81
TCRBP04435 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TCRBP04435 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.11■□□□□ 0.81
TCRBP04435 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
TCRBP04435 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TCRBP04435 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC20.11■□□□□ 0.81
TCRBP04435 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.11■□□□□ 0.81
TCRBP04435 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
TCRBP04435 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TCRBP04435 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.1■□□□□ 0.81
TCRBP04435 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
TCRBP04435 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TCRBP04435 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
TCRBP04435 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.09■□□□□ 0.81
TCRBP04435 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TCRBP04435 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.09■□□□□ 0.81
TCRBP04435 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TCRBP04435 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TCRBP04435 AC110285.7-201ENST00000624417 1536 ntBASIC20.09■□□□□ 0.81
TCRBP04435 RPS2-209ENST00000529806 993 ntTSL 3 BASIC20.09■□□□□ 0.81
TCRBP04435 SETD8P1-201ENST00000623146 1180 ntBASIC20.09■□□□□ 0.81
TCRBP04435 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.09■□□□□ 0.81
TCRBP04435 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.09■□□□□ 0.81
TCRBP04435 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.09■□□□□ 0.81
TCRBP04435 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TCRBP04435 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
TCRBP04435 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TCRBP04435 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.09■□□□□ 0.81
TCRBP04435 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TCRBP04435 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TCRBP04435 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.09■□□□□ 0.81
TCRBP04435 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
TCRBP04435 EP400NL-214ENST00000641289 2402 ntBASIC20.08■□□□□ 0.81
TCRBP04435 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
TCRBP04435 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
TCRBP04435 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TCRBP04435 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
TCRBP04435 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
TCRBP04435 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TCRBP04435 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TCRBP04435 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TCRBP04435 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC20.07■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms