Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CLDN1O95832 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CLDN1O95832 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC21.21■□□□□ 0.99
CLDN1O95832 MIR6724-1-201ENST00000616420 92 ntBASIC21.21■□□□□ 0.99
CLDN1O95832 MIR6724-2-201ENST00000616483 92 ntBASIC21.21■□□□□ 0.99
CLDN1O95832 MIR6724-4-201ENST00000617390 92 ntBASIC21.21■□□□□ 0.99
CLDN1O95832 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CLDN1O95832 MIR6724-3-201ENST00000622482 92 ntBASIC21.21■□□□□ 0.99
CLDN1O95832 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CLDN1O95832 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CLDN1O95832 AP002414.2-202ENST00000590929 1450 ntBASIC21.2■□□□□ 0.98
CLDN1O95832 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC21.2■□□□□ 0.98
CLDN1O95832 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC21.2■□□□□ 0.98
CLDN1O95832 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CLDN1O95832 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC21.2■□□□□ 0.98
CLDN1O95832 AL356740.2-201ENST00000601559 647 ntBASIC21.2■□□□□ 0.98
CLDN1O95832 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CLDN1O95832 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC21.2■□□□□ 0.98
CLDN1O95832 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CLDN1O95832 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC21.19■□□□□ 0.98
CLDN1O95832 AC135279.3-201ENST00000610945 1311 ntBASIC21.19■□□□□ 0.98
CLDN1O95832 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CLDN1O95832 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CLDN1O95832 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC21.18■□□□□ 0.98
CLDN1O95832 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC21.18■□□□□ 0.98
CLDN1O95832 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC21.18■□□□□ 0.98
CLDN1O95832 LSM4-201ENST00000252816 986 ntTSL 2 BASIC21.17■□□□□ 0.98
CLDN1O95832 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
CLDN1O95832 MIR5787-201ENST00000611784 55 ntBASIC21.17■□□□□ 0.98
CLDN1O95832 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC21.17■□□□□ 0.98
CLDN1O95832 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC21.17■□□□□ 0.98
CLDN1O95832 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC21.17■□□□□ 0.98
CLDN1O95832 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CLDN1O95832 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC21.16■□□□□ 0.98
CLDN1O95832 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CLDN1O95832 QDPR-206ENST00000508623 601 ntTSL 3 BASIC21.16■□□□□ 0.98
CLDN1O95832 AC142381.2-201ENST00000566120 298 ntBASIC21.16■□□□□ 0.98
CLDN1O95832 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC21.16■□□□□ 0.98
CLDN1O95832 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
CLDN1O95832 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC21.15■□□□□ 0.98
CLDN1O95832 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC21.15■□□□□ 0.98
CLDN1O95832 MTDHP2-201ENST00000601468 714 ntBASIC21.15■□□□□ 0.98
CLDN1O95832 AL512631.2-201ENST00000604634 923 ntBASIC21.15■□□□□ 0.98
CLDN1O95832 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
CLDN1O95832 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CLDN1O95832 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC21.15■□□□□ 0.98
CLDN1O95832 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CLDN1O95832 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CLDN1O95832 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CLDN1O95832 LGR4-203ENST00000480977 492 ntTSL 2 BASIC21.14■□□□□ 0.97
CLDN1O95832 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC21.14■□□□□ 0.97
CLDN1O95832 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC21.14■□□□□ 0.97
CLDN1O95832 AC106739.1-201ENST00000617035 715 ntBASIC21.14■□□□□ 0.97
CLDN1O95832 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CLDN1O95832 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
CLDN1O95832 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CLDN1O95832 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
CLDN1O95832 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CLDN1O95832 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC21.13■□□□□ 0.97
CLDN1O95832 PBX2P1-201ENST00000493219 1291 ntBASIC21.13■□□□□ 0.97
CLDN1O95832 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC21.13■□□□□ 0.97
CLDN1O95832 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CLDN1O95832 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC21.12■□□□□ 0.97
CLDN1O95832 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CLDN1O95832 KRT18P10-201ENST00000388836 1287 ntBASIC21.12■□□□□ 0.97
CLDN1O95832 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC21.12■□□□□ 0.97
CLDN1O95832 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC21.12■□□□□ 0.97
CLDN1O95832 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
CLDN1O95832 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC21.12■□□□□ 0.97
CLDN1O95832 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CLDN1O95832 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC21.12■□□□□ 0.97
CLDN1O95832 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
CLDN1O95832 TK2-202ENST00000417693 1046 ntTSL 2 BASIC21.11■□□□□ 0.97
CLDN1O95832 MIR4281-201ENST00000580852 62 ntBASIC21.11■□□□□ 0.97
CLDN1O95832 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC21.11■□□□□ 0.97
CLDN1O95832 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC21.11■□□□□ 0.97
CLDN1O95832 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CLDN1O95832 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CLDN1O95832 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC21.1■□□□□ 0.97
CLDN1O95832 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC21.1■□□□□ 0.97
CLDN1O95832 AK3-203ENST00000447596 705 ntTSL 2 BASIC21.1■□□□□ 0.97
CLDN1O95832 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
CLDN1O95832 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC21.1■□□□□ 0.97
CLDN1O95832 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CLDN1O95832 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CLDN1O95832 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CLDN1O95832 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
CLDN1O95832 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CLDN1O95832 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CLDN1O95832 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CLDN1O95832 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CLDN1O95832 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CLDN1O95832 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
CLDN1O95832 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
CLDN1O95832 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CLDN1O95832 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CLDN1O95832 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CLDN1O95832 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC21.09■□□□□ 0.97
CLDN1O95832 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC21.08■□□□□ 0.97
CLDN1O95832 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms