Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ABCA1O95477 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC19.87■□□□□ 0.77
ABCA1O95477 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ABCA1O95477 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
ABCA1O95477 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ABCA1O95477 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
ABCA1O95477 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
ABCA1O95477 MIR4281-201ENST00000580852 62 ntBASIC19.87■□□□□ 0.77
ABCA1O95477 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
ABCA1O95477 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
ABCA1O95477 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ABCA1O95477 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ABCA1O95477 AL449106.1-201ENST00000608517 1980 ntBASIC19.86■□□□□ 0.77
ABCA1O95477 TSPY9P-201ENST00000440215 945 ntBASIC19.86■□□□□ 0.77
ABCA1O95477 TSPY11P-201ENST00000442607 1045 ntBASIC19.86■□□□□ 0.77
ABCA1O95477 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
ABCA1O95477 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
ABCA1O95477 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
ABCA1O95477 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ABCA1O95477 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ABCA1O95477 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ABCA1O95477 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
ABCA1O95477 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ABCA1O95477 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC19.86■□□□□ 0.77
ABCA1O95477 AC120024.1-201ENST00000562672 995 ntBASIC19.86■□□□□ 0.77
ABCA1O95477 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC19.86■□□□□ 0.77
ABCA1O95477 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
ABCA1O95477 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC19.86■□□□□ 0.77
ABCA1O95477 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC19.85■□□□□ 0.77
ABCA1O95477 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ABCA1O95477 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ABCA1O95477 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC19.85■□□□□ 0.77
ABCA1O95477 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ABCA1O95477 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC19.85■□□□□ 0.77
ABCA1O95477 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
ABCA1O95477 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ABCA1O95477 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ABCA1O95477 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
ABCA1O95477 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
ABCA1O95477 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC19.83■□□□□ 0.77
ABCA1O95477 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ABCA1O95477 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC19.83■□□□□ 0.76
ABCA1O95477 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC19.83■□□□□ 0.76
ABCA1O95477 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.76
ABCA1O95477 MIR4466-201ENST00000606121 54 ntBASIC19.83■□□□□ 0.76
ABCA1O95477 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
ABCA1O95477 AL136116.3-201ENST00000402907 1138 ntBASIC19.82■□□□□ 0.76
ABCA1O95477 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ABCA1O95477 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC19.82■□□□□ 0.76
ABCA1O95477 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC19.82■□□□□ 0.76
ABCA1O95477 PKM-203ENST00000389093 2279 ntTSL 5 BASIC19.82■□□□□ 0.76
ABCA1O95477 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC19.82■□□□□ 0.76
ABCA1O95477 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
ABCA1O95477 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
ABCA1O95477 AC142086.6-201ENST00000621154 1765 ntBASIC19.82■□□□□ 0.76
ABCA1O95477 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ABCA1O95477 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
ABCA1O95477 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
ABCA1O95477 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ABCA1O95477 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ABCA1O95477 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC19.81■□□□□ 0.76
ABCA1O95477 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
ABCA1O95477 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
ABCA1O95477 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
ABCA1O95477 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
ABCA1O95477 BX255925.1-201ENST00000566954 1854 ntBASIC19.8■□□□□ 0.76
ABCA1O95477 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC19.8■□□□□ 0.76
ABCA1O95477 AC005837.3-201ENST00000612163 286 ntBASIC19.8■□□□□ 0.76
ABCA1O95477 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
ABCA1O95477 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
ABCA1O95477 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ABCA1O95477 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
ABCA1O95477 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
ABCA1O95477 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
ABCA1O95477 AL121749.1-202ENST00000609313 2153 ntBASIC19.79■□□□□ 0.76
ABCA1O95477 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
ABCA1O95477 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC19.79■□□□□ 0.76
ABCA1O95477 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
ABCA1O95477 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC19.79■□□□□ 0.76
ABCA1O95477 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC19.79■□□□□ 0.76
ABCA1O95477 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ABCA1O95477 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
ABCA1O95477 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC19.78■□□□□ 0.76
ABCA1O95477 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
ABCA1O95477 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC19.78■□□□□ 0.76
ABCA1O95477 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
ABCA1O95477 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ABCA1O95477 QDPR-206ENST00000508623 601 ntTSL 3 BASIC19.78■□□□□ 0.76
ABCA1O95477 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
ABCA1O95477 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
ABCA1O95477 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ABCA1O95477 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC19.78■□□□□ 0.76
ABCA1O95477 SENP5-202ENST00000419026 973 ntTSL 3 BASIC19.77■□□□□ 0.76
ABCA1O95477 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC19.77■□□□□ 0.76
ABCA1O95477 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ABCA1O95477 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
ABCA1O95477 AL117332.1-201ENST00000622628 974 ntBASIC19.77■□□□□ 0.76
ABCA1O95477 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC19.77■□□□□ 0.76
ABCA1O95477 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC19.77■□□□□ 0.76
ABCA1O95477 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms