Protein–RNA interactions for Protein: O95104

SCAF4, Splicing factor, arginine/serine-rich 15, humanhuman

Known RBP Predictions only

Length 1,147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4O95104 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SCAF4O95104 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
SCAF4O95104 CASK-201ENST00000378154 2494 ntTSL 5 BASIC19.25■□□□□ 0.67
SCAF4O95104 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SCAF4O95104 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SCAF4O95104 HLA-V-202ENST00000446817 847 ntBASIC19.24■□□□□ 0.67
SCAF4O95104 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC19.24■□□□□ 0.67
SCAF4O95104 MIR3648-2-201ENST00000581792 180 ntBASIC19.24■□□□□ 0.67
SCAF4O95104 AC016575.1-201ENST00000607026 382 ntBASIC19.24■□□□□ 0.67
SCAF4O95104 MIR3648-1-201ENST00000615959 180 ntBASIC19.24■□□□□ 0.67
SCAF4O95104 CR559946.2-201ENST00000623684 991 ntBASIC19.24■□□□□ 0.67
SCAF4O95104 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SCAF4O95104 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SCAF4O95104 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SCAF4O95104 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
SCAF4O95104 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SCAF4O95104 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SCAF4O95104 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
SCAF4O95104 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SCAF4O95104 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC19.23■□□□□ 0.67
SCAF4O95104 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC19.23■□□□□ 0.67
SCAF4O95104 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SCAF4O95104 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SCAF4O95104 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
SCAF4O95104 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC19.22■□□□□ 0.67
SCAF4O95104 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SCAF4O95104 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SCAF4O95104 MACF1-219ENST00000484793 834 ntTSL 2 BASIC19.22■□□□□ 0.67
SCAF4O95104 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SCAF4O95104 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SCAF4O95104 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SCAF4O95104 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SCAF4O95104 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC19.21■□□□□ 0.67
SCAF4O95104 HES6-205ENST00000409356 528 ntTSL 2 BASIC19.21■□□□□ 0.67
SCAF4O95104 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC19.21■□□□□ 0.67
SCAF4O95104 MBP-237ENST00000579129 1052 ntTSL 5 BASIC19.21■□□□□ 0.67
SCAF4O95104 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SCAF4O95104 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC19.21■□□□□ 0.67
SCAF4O95104 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SCAF4O95104 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SCAF4O95104 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SCAF4O95104 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SCAF4O95104 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SCAF4O95104 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SCAF4O95104 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SCAF4O95104 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC19.2■□□□□ 0.66
SCAF4O95104 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC19.2■□□□□ 0.66
SCAF4O95104 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SCAF4O95104 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SCAF4O95104 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
SCAF4O95104 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC19.19■□□□□ 0.66
SCAF4O95104 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SCAF4O95104 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SCAF4O95104 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC19.19■□□□□ 0.66
SCAF4O95104 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SCAF4O95104 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SCAF4O95104 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
SCAF4O95104 CLDN5-201ENST00000403084 2357 ntBASIC19.18■□□□□ 0.66
SCAF4O95104 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SCAF4O95104 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SCAF4O95104 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SCAF4O95104 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC19.18■□□□□ 0.66
SCAF4O95104 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
SCAF4O95104 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC19.17■□□□□ 0.66
SCAF4O95104 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC19.17■□□□□ 0.66
SCAF4O95104 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC19.17■□□□□ 0.66
SCAF4O95104 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SCAF4O95104 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SCAF4O95104 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SCAF4O95104 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
SCAF4O95104 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SCAF4O95104 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
SCAF4O95104 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SCAF4O95104 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SCAF4O95104 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
SCAF4O95104 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SCAF4O95104 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC19.16■□□□□ 0.66
SCAF4O95104 AC141586.4-201ENST00000624558 1573 ntBASIC19.16■□□□□ 0.66
SCAF4O95104 RPS2-202ENST00000526522 924 ntTSL 2 BASIC19.16■□□□□ 0.66
SCAF4O95104 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SCAF4O95104 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SCAF4O95104 AC096887.2-201ENST00000623443 1957 ntBASIC19.15■□□□□ 0.66
SCAF4O95104 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
SCAF4O95104 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SCAF4O95104 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
SCAF4O95104 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
SCAF4O95104 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
SCAF4O95104 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SCAF4O95104 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SCAF4O95104 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
SCAF4O95104 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SCAF4O95104 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
SCAF4O95104 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
SCAF4O95104 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SCAF4O95104 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SCAF4O95104 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SCAF4O95104 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SCAF4O95104 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SCAF4O95104 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SCAF4O95104 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms