Protein–RNA interactions for Protein: O60896

RAMP3, Receptor activity-modifying protein 3, humanhuman

Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAMP3O60896 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RAMP3O60896 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
RAMP3O60896 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RAMP3O60896 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC19.38■□□□□ 0.69
RAMP3O60896 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC19.38■□□□□ 0.69
RAMP3O60896 AL157400.5-201ENST00000507624 621 ntBASIC19.38■□□□□ 0.69
RAMP3O60896 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RAMP3O60896 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC19.38■□□□□ 0.69
RAMP3O60896 LINC01124-201ENST00000409786 2117 ntBASIC19.37■□□□□ 0.69
RAMP3O60896 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
RAMP3O60896 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAMP3O60896 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAMP3O60896 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAMP3O60896 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAMP3O60896 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAMP3O60896 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RAMP3O60896 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC19.37■□□□□ 0.69
RAMP3O60896 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC19.37■□□□□ 0.69
RAMP3O60896 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RAMP3O60896 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RAMP3O60896 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RAMP3O60896 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
RAMP3O60896 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
RAMP3O60896 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RAMP3O60896 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RAMP3O60896 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RAMP3O60896 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RAMP3O60896 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
RAMP3O60896 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RAMP3O60896 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
RAMP3O60896 AP003733.4-201ENST00000623785 1697 ntBASIC19.36■□□□□ 0.69
RAMP3O60896 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC19.35■□□□□ 0.69
RAMP3O60896 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC19.35■□□□□ 0.69
RAMP3O60896 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RAMP3O60896 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RAMP3O60896 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RAMP3O60896 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RAMP3O60896 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RAMP3O60896 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
RAMP3O60896 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RAMP3O60896 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RAMP3O60896 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RAMP3O60896 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RAMP3O60896 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RAMP3O60896 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RAMP3O60896 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
RAMP3O60896 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
RAMP3O60896 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RAMP3O60896 MOB2-207ENST00000614710 705 ntTSL 5 BASIC19.34■□□□□ 0.69
RAMP3O60896 AC022413.1-201ENST00000624602 984 ntBASIC19.34■□□□□ 0.69
RAMP3O60896 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC19.34■□□□□ 0.69
RAMP3O60896 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RAMP3O60896 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
RAMP3O60896 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC19.34■□□□□ 0.69
RAMP3O60896 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RAMP3O60896 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
RAMP3O60896 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RAMP3O60896 EED-207ENST00000528180 1745 ntTSL 5 BASIC19.34■□□□□ 0.69
RAMP3O60896 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC19.34■□□□□ 0.69
RAMP3O60896 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RAMP3O60896 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
RAMP3O60896 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
RAMP3O60896 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.69
RAMP3O60896 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RAMP3O60896 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
RAMP3O60896 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RAMP3O60896 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RAMP3O60896 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RAMP3O60896 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
RAMP3O60896 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
RAMP3O60896 PFN2-211ENST00000489155 636 ntTSL 4 BASIC19.32■□□□□ 0.68
RAMP3O60896 AC025884.2-201ENST00000553429 711 ntBASIC19.32■□□□□ 0.68
RAMP3O60896 AC060814.1-201ENST00000554326 538 ntBASIC19.32■□□□□ 0.68
RAMP3O60896 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RAMP3O60896 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RAMP3O60896 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
RAMP3O60896 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RAMP3O60896 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RAMP3O60896 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RAMP3O60896 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RAMP3O60896 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC19.31■□□□□ 0.68
RAMP3O60896 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC19.31■□□□□ 0.68
RAMP3O60896 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RAMP3O60896 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC19.31■□□□□ 0.68
RAMP3O60896 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
RAMP3O60896 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RAMP3O60896 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
RAMP3O60896 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC19.3■□□□□ 0.68
RAMP3O60896 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RAMP3O60896 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
RAMP3O60896 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RAMP3O60896 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC19.29■□□□□ 0.68
RAMP3O60896 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RAMP3O60896 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC19.29■□□□□ 0.68
RAMP3O60896 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
RAMP3O60896 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC19.29■□□□□ 0.68
RAMP3O60896 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RAMP3O60896 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
RAMP3O60896 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RAMP3O60896 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 10.6 ms