Protein–RNA interactions for Protein: O60500

NPHS1, Nephrin, humanhuman

Predictions only

Length 1,241 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHS1O60500 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC23.18■■□□□ 1.3
NPHS1O60500 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
NPHS1O60500 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC23.17■■□□□ 1.3
NPHS1O60500 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
NPHS1O60500 AL157400.5-201ENST00000507624 621 ntBASIC23.17■■□□□ 1.3
NPHS1O60500 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
NPHS1O60500 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC23.17■■□□□ 1.3
NPHS1O60500 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
NPHS1O60500 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
NPHS1O60500 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC23.16■■□□□ 1.3
NPHS1O60500 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
NPHS1O60500 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
NPHS1O60500 ABHD17AP4-201ENST00000411545 909 ntBASIC23.15■■□□□ 1.3
NPHS1O60500 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC23.15■■□□□ 1.3
NPHS1O60500 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC23.15■■□□□ 1.3
NPHS1O60500 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
NPHS1O60500 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC23.15■■□□□ 1.3
NPHS1O60500 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
NPHS1O60500 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
NPHS1O60500 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
NPHS1O60500 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
NPHS1O60500 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
NPHS1O60500 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC23.14■■□□□ 1.3
NPHS1O60500 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
NPHS1O60500 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC23.14■■□□□ 1.29
NPHS1O60500 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.29
NPHS1O60500 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.29
NPHS1O60500 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC23.13■■□□□ 1.29
NPHS1O60500 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
NPHS1O60500 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
NPHS1O60500 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
NPHS1O60500 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
NPHS1O60500 MIR3960-201ENST00000583311 91 ntBASIC23.13■■□□□ 1.29
NPHS1O60500 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
NPHS1O60500 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
NPHS1O60500 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC23.13■■□□□ 1.29
NPHS1O60500 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
NPHS1O60500 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC23.12■■□□□ 1.29
NPHS1O60500 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
NPHS1O60500 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
NPHS1O60500 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
NPHS1O60500 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
NPHS1O60500 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC23.12■■□□□ 1.29
NPHS1O60500 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
NPHS1O60500 AC016575.1-201ENST00000607026 382 ntBASIC23.12■■□□□ 1.29
NPHS1O60500 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
NPHS1O60500 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
NPHS1O60500 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC23.12■■□□□ 1.29
NPHS1O60500 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
NPHS1O60500 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
NPHS1O60500 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
NPHS1O60500 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
NPHS1O60500 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC23.11■■□□□ 1.29
NPHS1O60500 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC23.11■■□□□ 1.29
NPHS1O60500 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
NPHS1O60500 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
NPHS1O60500 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC23.11■■□□□ 1.29
NPHS1O60500 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC23.11■■□□□ 1.29
NPHS1O60500 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
NPHS1O60500 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
NPHS1O60500 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
NPHS1O60500 MOB2-207ENST00000614710 705 ntTSL 5 BASIC23.1■■□□□ 1.29
NPHS1O60500 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
NPHS1O60500 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC23.1■■□□□ 1.29
NPHS1O60500 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC23.1■■□□□ 1.29
NPHS1O60500 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC23.1■■□□□ 1.29
NPHS1O60500 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC23.1■■□□□ 1.29
NPHS1O60500 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
NPHS1O60500 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
NPHS1O60500 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
NPHS1O60500 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
NPHS1O60500 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
NPHS1O60500 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
NPHS1O60500 MIR6089-201ENST00000616698 64 ntBASIC23.09■■□□□ 1.29
NPHS1O60500 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
NPHS1O60500 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
NPHS1O60500 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC23.09■■□□□ 1.29
NPHS1O60500 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC23.08■■□□□ 1.29
NPHS1O60500 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
NPHS1O60500 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
NPHS1O60500 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
NPHS1O60500 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC23.08■■□□□ 1.29
NPHS1O60500 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
NPHS1O60500 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
NPHS1O60500 AC060814.1-201ENST00000554326 538 ntBASIC23.08■■□□□ 1.29
NPHS1O60500 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC23.08■■□□□ 1.29
NPHS1O60500 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
NPHS1O60500 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
NPHS1O60500 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
NPHS1O60500 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
NPHS1O60500 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
NPHS1O60500 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC23.07■■□□□ 1.28
NPHS1O60500 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC23.07■■□□□ 1.28
NPHS1O60500 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
NPHS1O60500 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC23.07■■□□□ 1.28
NPHS1O60500 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
NPHS1O60500 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
NPHS1O60500 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
NPHS1O60500 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
NPHS1O60500 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 11.6 ms