Protein–RNA interactions for Protein: O60500

NPHS1, Nephrin, humanhuman

Predictions only

Length 1,241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHS1O60500 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC23.18■■□□□ 1.3
NPHS1O60500 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
NPHS1O60500 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC23.17■■□□□ 1.3
NPHS1O60500 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
NPHS1O60500 AL157400.5-201ENST00000507624 621 ntBASIC23.17■■□□□ 1.3
NPHS1O60500 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
NPHS1O60500 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC23.17■■□□□ 1.3
NPHS1O60500 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
NPHS1O60500 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
NPHS1O60500 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC23.16■■□□□ 1.3
NPHS1O60500 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
NPHS1O60500 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
NPHS1O60500 ABHD17AP4-201ENST00000411545 909 ntBASIC23.15■■□□□ 1.3
NPHS1O60500 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC23.15■■□□□ 1.3
NPHS1O60500 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC23.15■■□□□ 1.3
NPHS1O60500 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
NPHS1O60500 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC23.15■■□□□ 1.3
NPHS1O60500 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
NPHS1O60500 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
NPHS1O60500 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
NPHS1O60500 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
NPHS1O60500 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
NPHS1O60500 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC23.14■■□□□ 1.3
NPHS1O60500 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
NPHS1O60500 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC23.14■■□□□ 1.29
NPHS1O60500 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.29
NPHS1O60500 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.29
NPHS1O60500 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC23.13■■□□□ 1.29
NPHS1O60500 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
NPHS1O60500 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
NPHS1O60500 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
NPHS1O60500 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
NPHS1O60500 MIR3960-201ENST00000583311 91 ntBASIC23.13■■□□□ 1.29
NPHS1O60500 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
NPHS1O60500 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
NPHS1O60500 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC23.13■■□□□ 1.29
NPHS1O60500 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
NPHS1O60500 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC23.12■■□□□ 1.29
NPHS1O60500 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
NPHS1O60500 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
NPHS1O60500 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
NPHS1O60500 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
NPHS1O60500 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC23.12■■□□□ 1.29
NPHS1O60500 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
NPHS1O60500 AC016575.1-201ENST00000607026 382 ntBASIC23.12■■□□□ 1.29
NPHS1O60500 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
NPHS1O60500 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
NPHS1O60500 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC23.12■■□□□ 1.29
NPHS1O60500 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
NPHS1O60500 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
NPHS1O60500 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
NPHS1O60500 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
NPHS1O60500 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC23.11■■□□□ 1.29
NPHS1O60500 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC23.11■■□□□ 1.29
NPHS1O60500 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
NPHS1O60500 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
NPHS1O60500 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC23.11■■□□□ 1.29
NPHS1O60500 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC23.11■■□□□ 1.29
NPHS1O60500 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
NPHS1O60500 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
NPHS1O60500 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
NPHS1O60500 MOB2-207ENST00000614710 705 ntTSL 5 BASIC23.1■■□□□ 1.29
NPHS1O60500 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
NPHS1O60500 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC23.1■■□□□ 1.29
NPHS1O60500 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC23.1■■□□□ 1.29
NPHS1O60500 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC23.1■■□□□ 1.29
NPHS1O60500 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC23.1■■□□□ 1.29
NPHS1O60500 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
NPHS1O60500 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
NPHS1O60500 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
NPHS1O60500 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
NPHS1O60500 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
NPHS1O60500 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
NPHS1O60500 MIR6089-201ENST00000616698 64 ntBASIC23.09■■□□□ 1.29
NPHS1O60500 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
NPHS1O60500 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
NPHS1O60500 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC23.09■■□□□ 1.29
NPHS1O60500 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC23.08■■□□□ 1.29
NPHS1O60500 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
NPHS1O60500 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
NPHS1O60500 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
NPHS1O60500 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC23.08■■□□□ 1.29
NPHS1O60500 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
NPHS1O60500 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
NPHS1O60500 AC060814.1-201ENST00000554326 538 ntBASIC23.08■■□□□ 1.29
NPHS1O60500 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC23.08■■□□□ 1.29
NPHS1O60500 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
NPHS1O60500 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
NPHS1O60500 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
NPHS1O60500 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
NPHS1O60500 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
NPHS1O60500 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC23.07■■□□□ 1.28
NPHS1O60500 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC23.07■■□□□ 1.28
NPHS1O60500 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
NPHS1O60500 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC23.07■■□□□ 1.28
NPHS1O60500 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
NPHS1O60500 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
NPHS1O60500 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
NPHS1O60500 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
NPHS1O60500 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms