Protein–RNA interactions for Protein: O60287

URB1, Nucleolar pre-ribosomal-associated protein 1, humanhuman

Known RBP Predictions only

Length 2,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
URB1O60287 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
URB1O60287 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
URB1O60287 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
URB1O60287 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
URB1O60287 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC22.54■■□□□ 1.2
URB1O60287 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
URB1O60287 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
URB1O60287 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
URB1O60287 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC22.54■■□□□ 1.2
URB1O60287 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
URB1O60287 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC22.54■■□□□ 1.2
URB1O60287 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC22.54■■□□□ 1.2
URB1O60287 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC22.54■■□□□ 1.2
URB1O60287 AK3-203ENST00000447596 705 ntTSL 2 BASIC22.54■■□□□ 1.2
URB1O60287 AC087623.3-201ENST00000607047 1098 ntBASIC22.54■■□□□ 1.2
URB1O60287 RASSF1-AS1-201ENST00000629828 790 ntBASIC22.54■■□□□ 1.2
URB1O60287 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
URB1O60287 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
URB1O60287 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
URB1O60287 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
URB1O60287 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC22.53■■□□□ 1.2
URB1O60287 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
URB1O60287 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC22.53■■□□□ 1.2
URB1O60287 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
URB1O60287 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
URB1O60287 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
URB1O60287 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
URB1O60287 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC22.52■■□□□ 1.2
URB1O60287 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC22.52■■□□□ 1.2
URB1O60287 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC22.52■■□□□ 1.2
URB1O60287 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC22.51■■□□□ 1.19
URB1O60287 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
URB1O60287 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
URB1O60287 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC22.51■■□□□ 1.19
URB1O60287 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
URB1O60287 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
URB1O60287 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
URB1O60287 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC22.5■■□□□ 1.19
URB1O60287 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
URB1O60287 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
URB1O60287 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
URB1O60287 AL162430.1-201ENST00000480705 870 ntBASIC22.5■■□□□ 1.19
URB1O60287 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
URB1O60287 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC22.49■■□□□ 1.19
URB1O60287 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC22.49■■□□□ 1.19
URB1O60287 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
URB1O60287 EDA-201ENST00000338901 1233 ntBASIC22.48■■□□□ 1.19
URB1O60287 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
URB1O60287 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC22.48■■□□□ 1.19
URB1O60287 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
URB1O60287 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC22.48■■□□□ 1.19
URB1O60287 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC22.47■■□□□ 1.19
URB1O60287 PARL-206ENST00000435888 1098 ntTSL 5 BASIC22.47■■□□□ 1.19
URB1O60287 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC22.47■■□□□ 1.19
URB1O60287 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
URB1O60287 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC22.47■■□□□ 1.19
URB1O60287 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC22.47■■□□□ 1.19
URB1O60287 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
URB1O60287 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
URB1O60287 ST7-205ENST00000393446 2114 ntTSL 5 BASIC22.46■■□□□ 1.19
URB1O60287 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC22.46■■□□□ 1.19
URB1O60287 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC22.46■■□□□ 1.19
URB1O60287 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
URB1O60287 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
URB1O60287 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
URB1O60287 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
URB1O60287 MIR6821-201ENST00000617625 74 ntBASIC22.46■■□□□ 1.19
URB1O60287 UNC93B3-201ENST00000308076 687 ntBASIC22.45■■□□□ 1.18
URB1O60287 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC22.45■■□□□ 1.18
URB1O60287 AC097381.1-201ENST00000429019 1296 ntBASIC22.45■■□□□ 1.18
URB1O60287 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
URB1O60287 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC22.45■■□□□ 1.18
URB1O60287 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
URB1O60287 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC22.45■■□□□ 1.18
URB1O60287 AC105265.2-201ENST00000467189 838 ntBASIC22.45■■□□□ 1.18
URB1O60287 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC22.45■■□□□ 1.18
URB1O60287 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC22.45■■□□□ 1.18
URB1O60287 ANKRD20A6P-201ENST00000618763 204 ntBASIC22.45■■□□□ 1.18
URB1O60287 AL355001.2-201ENST00000620617 1191 ntBASIC22.45■■□□□ 1.18
URB1O60287 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
URB1O60287 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
URB1O60287 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
URB1O60287 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC22.43■■□□□ 1.18
URB1O60287 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
URB1O60287 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC22.43■■□□□ 1.18
URB1O60287 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC22.43■■□□□ 1.18
URB1O60287 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
URB1O60287 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
URB1O60287 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
URB1O60287 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC22.42■■□□□ 1.18
URB1O60287 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC22.42■■□□□ 1.18
URB1O60287 AF213884.3-201ENST00000563833 479 ntBASIC22.42■■□□□ 1.18
URB1O60287 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
URB1O60287 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
URB1O60287 AC024257.2-201ENST00000549699 147 ntBASIC22.42■■□□□ 1.18
URB1O60287 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
URB1O60287 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
URB1O60287 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
URB1O60287 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
URB1O60287 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC22.41■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms