Protein–RNA interactions for Protein: O15020

SPTBN2, Spectrin beta chain, non-erythrocytic 2, humanhuman

Predictions only

Length 2,390 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN2O15020 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC23.09■■□□□ 1.29
SPTBN2O15020 GRAMD4P4-201ENST00000613563 1115 ntBASIC23.09■■□□□ 1.29
SPTBN2O15020 AC092437.1-201ENST00000624794 1048 ntBASIC23.09■■□□□ 1.29
SPTBN2O15020 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SPTBN2O15020 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC23.09■■□□□ 1.29
SPTBN2O15020 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
SPTBN2O15020 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC23.08■■□□□ 1.29
SPTBN2O15020 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SPTBN2O15020 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SPTBN2O15020 TFPT-201ENST00000391757 774 ntTSL 5 BASIC23.07■■□□□ 1.28
SPTBN2O15020 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
SPTBN2O15020 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC23.07■■□□□ 1.28
SPTBN2O15020 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SPTBN2O15020 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SPTBN2O15020 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SPTBN2O15020 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
SPTBN2O15020 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC23.07■■□□□ 1.28
SPTBN2O15020 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
SPTBN2O15020 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
SPTBN2O15020 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
SPTBN2O15020 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
SPTBN2O15020 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC23.06■■□□□ 1.28
SPTBN2O15020 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC23.06■■□□□ 1.28
SPTBN2O15020 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC23.06■■□□□ 1.28
SPTBN2O15020 RASA4CP-201ENST00000424092 1398 ntBASIC23.05■■□□□ 1.28
SPTBN2O15020 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SPTBN2O15020 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
SPTBN2O15020 CD72-202ENST00000378430 585 ntTSL 3 BASIC23.05■■□□□ 1.28
SPTBN2O15020 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
SPTBN2O15020 AC091305.1-201ENST00000479476 895 ntBASIC23.05■■□□□ 1.28
SPTBN2O15020 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC23.05■■□□□ 1.28
SPTBN2O15020 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
SPTBN2O15020 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SPTBN2O15020 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC23.05■■□□□ 1.28
SPTBN2O15020 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
SPTBN2O15020 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC23.04■■□□□ 1.28
SPTBN2O15020 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
SPTBN2O15020 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
SPTBN2O15020 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
SPTBN2O15020 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
SPTBN2O15020 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC23.03■■□□□ 1.28
SPTBN2O15020 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
SPTBN2O15020 PTMA-205ENST00000410064 814 ntTSL 2 BASIC23.03■■□□□ 1.28
SPTBN2O15020 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SPTBN2O15020 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SPTBN2O15020 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
SPTBN2O15020 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC23.03■■□□□ 1.28
SPTBN2O15020 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC23.03■■□□□ 1.28
SPTBN2O15020 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC23.03■■□□□ 1.28
SPTBN2O15020 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC23.02■■□□□ 1.28
SPTBN2O15020 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
SPTBN2O15020 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
SPTBN2O15020 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
SPTBN2O15020 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC23.02■■□□□ 1.28
SPTBN2O15020 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC23.01■■□□□ 1.27
SPTBN2O15020 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC23.01■■□□□ 1.27
SPTBN2O15020 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC23.01■■□□□ 1.27
SPTBN2O15020 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
SPTBN2O15020 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
SPTBN2O15020 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
SPTBN2O15020 KRT18P10-201ENST00000388836 1287 ntBASIC23■■□□□ 1.27
SPTBN2O15020 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
SPTBN2O15020 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
SPTBN2O15020 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC23■■□□□ 1.27
SPTBN2O15020 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
SPTBN2O15020 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
SPTBN2O15020 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
SPTBN2O15020 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC22.99■■□□□ 1.27
SPTBN2O15020 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
SPTBN2O15020 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC22.99■■□□□ 1.27
SPTBN2O15020 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
SPTBN2O15020 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
SPTBN2O15020 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
SPTBN2O15020 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC22.98■■□□□ 1.27
SPTBN2O15020 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
SPTBN2O15020 ASB1-202ENST00000409297 878 ntTSL 5 BASIC22.97■■□□□ 1.27
SPTBN2O15020 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC22.97■■□□□ 1.27
SPTBN2O15020 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC22.97■■□□□ 1.27
SPTBN2O15020 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC22.97■■□□□ 1.27
SPTBN2O15020 CLTA-210ENST00000540080 989 ntTSL 2 BASIC22.97■■□□□ 1.27
SPTBN2O15020 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
SPTBN2O15020 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
SPTBN2O15020 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
SPTBN2O15020 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
SPTBN2O15020 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
SPTBN2O15020 RHOF-204ENST00000537265 699 ntTSL 2 BASIC22.97■■□□□ 1.27
SPTBN2O15020 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC22.96■■□□□ 1.27
SPTBN2O15020 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
SPTBN2O15020 JTB-203ENST00000368589 1216 ntTSL 2 BASIC22.96■■□□□ 1.27
SPTBN2O15020 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC22.96■■□□□ 1.27
SPTBN2O15020 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
SPTBN2O15020 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC22.95■■□□□ 1.26
SPTBN2O15020 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
SPTBN2O15020 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC22.94■■□□□ 1.26
SPTBN2O15020 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC22.94■■□□□ 1.26
SPTBN2O15020 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC22.94■■□□□ 1.26
SPTBN2O15020 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
SPTBN2O15020 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC22.93■■□□□ 1.26
SPTBN2O15020 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
SPTBN2O15020 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms