Protein–RNA interactions for Protein: O14617

AP3D1, AP-3 complex subunit delta-1, humanhuman

Predictions only

Length 1,153 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1O14617 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
AP3D1O14617 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC22.03■■□□□ 1.12
AP3D1O14617 ABHD17AP3-201ENST00000503096 1137 ntBASIC22.03■■□□□ 1.12
AP3D1O14617 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
AP3D1O14617 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
AP3D1O14617 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
AP3D1O14617 MED17-227ENST00000640521 2047 ntTSL 5 BASIC22.02■■□□□ 1.12
AP3D1O14617 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
AP3D1O14617 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC22.02■■□□□ 1.12
AP3D1O14617 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
AP3D1O14617 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
AP3D1O14617 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
AP3D1O14617 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
AP3D1O14617 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
AP3D1O14617 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
AP3D1O14617 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC22.01■■□□□ 1.11
AP3D1O14617 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
AP3D1O14617 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC22■■□□□ 1.11
AP3D1O14617 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC22■■□□□ 1.11
AP3D1O14617 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC22■■□□□ 1.11
AP3D1O14617 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
AP3D1O14617 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC22■■□□□ 1.11
AP3D1O14617 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC22■■□□□ 1.11
AP3D1O14617 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
AP3D1O14617 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21.99■■□□□ 1.11
AP3D1O14617 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
AP3D1O14617 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
AP3D1O14617 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
AP3D1O14617 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
AP3D1O14617 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
AP3D1O14617 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
AP3D1O14617 AC097639.1-201ENST00000565519 1891 ntBASIC21.99■■□□□ 1.11
AP3D1O14617 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
AP3D1O14617 RP9P-202ENST00000450133 1212 ntBASIC21.99■■□□□ 1.11
AP3D1O14617 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC21.99■■□□□ 1.11
AP3D1O14617 AC007029.1-201ENST00000604183 313 ntBASIC21.99■■□□□ 1.11
AP3D1O14617 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC21.99■■□□□ 1.11
AP3D1O14617 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
AP3D1O14617 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
AP3D1O14617 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
AP3D1O14617 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC21.98■■□□□ 1.11
AP3D1O14617 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC21.98■■□□□ 1.11
AP3D1O14617 AC093536.1-201ENST00000569153 554 ntBASIC21.98■■□□□ 1.11
AP3D1O14617 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
AP3D1O14617 AC138932.3-201ENST00000567634 1902 ntBASIC21.98■■□□□ 1.11
AP3D1O14617 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
AP3D1O14617 HES4-202ENST00000428771 1040 ntTSL 2 BASIC21.97■■□□□ 1.11
AP3D1O14617 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
AP3D1O14617 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
AP3D1O14617 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC21.97■■□□□ 1.11
AP3D1O14617 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
AP3D1O14617 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
AP3D1O14617 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
AP3D1O14617 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC21.97■■□□□ 1.11
AP3D1O14617 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
AP3D1O14617 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
AP3D1O14617 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
AP3D1O14617 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
AP3D1O14617 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC21.96■■□□□ 1.11
AP3D1O14617 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
AP3D1O14617 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
AP3D1O14617 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC21.96■■□□□ 1.11
AP3D1O14617 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.11
AP3D1O14617 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
AP3D1O14617 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
AP3D1O14617 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
AP3D1O14617 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
AP3D1O14617 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
AP3D1O14617 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
AP3D1O14617 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
AP3D1O14617 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
AP3D1O14617 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC21.94■■□□□ 1.1
AP3D1O14617 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC21.94■■□□□ 1.1
AP3D1O14617 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC21.94■■□□□ 1.1
AP3D1O14617 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
AP3D1O14617 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
AP3D1O14617 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
AP3D1O14617 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
AP3D1O14617 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
AP3D1O14617 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
AP3D1O14617 THRA-202ENST00000394121 2260 ntTSL 2 BASIC21.93■■□□□ 1.1
AP3D1O14617 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC21.93■■□□□ 1.1
AP3D1O14617 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC21.93■■□□□ 1.1
AP3D1O14617 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC21.93■■□□□ 1.1
AP3D1O14617 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
AP3D1O14617 RNF126P1-201ENST00000567452 1320 ntBASIC21.92■■□□□ 1.1
AP3D1O14617 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC21.92■■□□□ 1.1
AP3D1O14617 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
AP3D1O14617 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
AP3D1O14617 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
AP3D1O14617 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
AP3D1O14617 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
AP3D1O14617 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
AP3D1O14617 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
AP3D1O14617 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.9■■□□□ 1.1
AP3D1O14617 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
AP3D1O14617 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
AP3D1O14617 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
AP3D1O14617 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
AP3D1O14617 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms