Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
SOX1O00570 AC091305.1-201ENST00000479476 895 ntBASIC25.88■■□□□ 1.73
SOX1O00570 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC25.88■■□□□ 1.73
SOX1O00570 AC092437.1-201ENST00000624794 1048 ntBASIC25.88■■□□□ 1.73
SOX1O00570 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
SOX1O00570 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
SOX1O00570 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC25.87■■□□□ 1.73
SOX1O00570 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
SOX1O00570 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC25.87■■□□□ 1.73
SOX1O00570 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
SOX1O00570 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
SOX1O00570 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
SOX1O00570 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC25.86■■□□□ 1.73
SOX1O00570 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
SOX1O00570 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC25.85■■□□□ 1.73
SOX1O00570 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC25.85■■□□□ 1.73
SOX1O00570 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
SOX1O00570 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
SOX1O00570 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
SOX1O00570 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
SOX1O00570 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC25.85■■□□□ 1.73
SOX1O00570 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC25.85■■□□□ 1.73
SOX1O00570 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
SOX1O00570 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
SOX1O00570 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC25.84■■□□□ 1.73
SOX1O00570 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC25.84■■□□□ 1.73
SOX1O00570 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC25.83■■□□□ 1.73
SOX1O00570 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC25.83■■□□□ 1.73
SOX1O00570 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC25.83■■□□□ 1.73
SOX1O00570 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
SOX1O00570 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC25.83■■□□□ 1.73
SOX1O00570 MAG-206ENST00000597035 542 ntTSL 4 BASIC25.83■■□□□ 1.73
SOX1O00570 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC25.83■■□□□ 1.72
SOX1O00570 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC25.83■■□□□ 1.72
SOX1O00570 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC25.82■■□□□ 1.72
SOX1O00570 ASB1-202ENST00000409297 878 ntTSL 5 BASIC25.82■■□□□ 1.72
SOX1O00570 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC25.81■■□□□ 1.72
SOX1O00570 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC25.81■■□□□ 1.72
SOX1O00570 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
SOX1O00570 SRD5A1P1-201ENST00000442297 786 ntBASIC25.81■■□□□ 1.72
SOX1O00570 CA15P2-201ENST00000611168 834 ntBASIC25.81■■□□□ 1.72
SOX1O00570 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC25.81■■□□□ 1.72
SOX1O00570 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC25.8■■□□□ 1.72
SOX1O00570 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC25.8■■□□□ 1.72
SOX1O00570 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
SOX1O00570 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
SOX1O00570 JTB-203ENST00000368589 1216 ntTSL 2 BASIC25.8■■□□□ 1.72
SOX1O00570 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC25.8■■□□□ 1.72
SOX1O00570 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC25.8■■□□□ 1.72
SOX1O00570 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC25.79■■□□□ 1.72
SOX1O00570 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC25.79■■□□□ 1.72
SOX1O00570 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
SOX1O00570 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC25.79■■□□□ 1.72
SOX1O00570 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC25.79■■□□□ 1.72
SOX1O00570 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC25.78■■□□□ 1.72
SOX1O00570 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC25.78■■□□□ 1.72
SOX1O00570 GAK-223ENST00000628912 497 ntTSL 5 BASIC25.78■■□□□ 1.72
SOX1O00570 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC25.78■■□□□ 1.72
SOX1O00570 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC25.77■■□□□ 1.72
SOX1O00570 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC25.77■■□□□ 1.72
SOX1O00570 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC25.77■■□□□ 1.72
SOX1O00570 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
SOX1O00570 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
SOX1O00570 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
SOX1O00570 CLTA-206ENST00000466396 695 ntTSL 2 BASIC25.76■■□□□ 1.71
SOX1O00570 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
SOX1O00570 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
SOX1O00570 IRS3P-201ENST00000223076 1006 ntBASIC25.75■■□□□ 1.71
SOX1O00570 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
SOX1O00570 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC25.75■■□□□ 1.71
SOX1O00570 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC25.75■■□□□ 1.71
SOX1O00570 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
SOX1O00570 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
SOX1O00570 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
SOX1O00570 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC25.74■■□□□ 1.71
SOX1O00570 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC25.74■■□□□ 1.71
SOX1O00570 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
SOX1O00570 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC25.74■■□□□ 1.71
SOX1O00570 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC25.74■■□□□ 1.71
SOX1O00570 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC25.74■■□□□ 1.71
SOX1O00570 AC004911.1-201ENST00000416316 871 ntBASIC25.73■■□□□ 1.71
SOX1O00570 KRT18P5-201ENST00000436075 1291 ntBASIC25.73■■□□□ 1.71
SOX1O00570 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC25.73■■□□□ 1.71
SOX1O00570 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC25.73■■□□□ 1.71
SOX1O00570 AP002414.2-202ENST00000590929 1450 ntBASIC25.72■■□□□ 1.71
SOX1O00570 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC25.72■■□□□ 1.71
SOX1O00570 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
SOX1O00570 RASA4CP-201ENST00000424092 1398 ntBASIC25.72■■□□□ 1.71
SOX1O00570 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
SOX1O00570 HACD1-201ENST00000326961 773 ntTSL 2 BASIC25.72■■□□□ 1.71
SOX1O00570 SLC47A1P1-202ENST00000449666 945 ntBASIC25.72■■□□□ 1.71
SOX1O00570 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC25.72■■□□□ 1.71
SOX1O00570 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC25.72■■□□□ 1.71
SOX1O00570 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC25.72■■□□□ 1.71
SOX1O00570 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC25.72■■□□□ 1.71
SOX1O00570 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
SOX1O00570 DLX3-202ENST00000512495 834 ntTSL 2 BASIC25.71■■□□□ 1.71
SOX1O00570 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC25.71■■□□□ 1.71
SOX1O00570 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
SOX1O00570 SP2-202ENST00000613139 908 ntTSL 5 BASIC25.71■■□□□ 1.71
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms