Protein–RNA interactions for Protein: B4DS77

SHISA9, Protein shisa-9, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA9B4DS77 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
SHISA9B4DS77 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
SHISA9B4DS77 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
SHISA9B4DS77 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SHISA9B4DS77 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SHISA9B4DS77 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC20.42■□□□□ 0.86
SHISA9B4DS77 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SHISA9B4DS77 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC20.42■□□□□ 0.86
SHISA9B4DS77 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
SHISA9B4DS77 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SHISA9B4DS77 CREM-229ENST00000474362 1030 ntTSL 2 BASIC20.42■□□□□ 0.86
SHISA9B4DS77 AC137630.3-201ENST00000607245 391 ntBASIC20.42■□□□□ 0.86
SHISA9B4DS77 AC131212.1-201ENST00000613771 668 ntBASIC20.42■□□□□ 0.86
SHISA9B4DS77 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SHISA9B4DS77 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
SHISA9B4DS77 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SHISA9B4DS77 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
SHISA9B4DS77 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SHISA9B4DS77 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC20.41■□□□□ 0.86
SHISA9B4DS77 MIR4787-201ENST00000607364 84 ntBASIC20.41■□□□□ 0.86
SHISA9B4DS77 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
SHISA9B4DS77 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SHISA9B4DS77 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SHISA9B4DS77 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC20.41■□□□□ 0.86
SHISA9B4DS77 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SHISA9B4DS77 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SHISA9B4DS77 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC20.4■□□□□ 0.86
SHISA9B4DS77 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
SHISA9B4DS77 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC20.4■□□□□ 0.86
SHISA9B4DS77 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC20.39■□□□□ 0.86
SHISA9B4DS77 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SHISA9B4DS77 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.39■□□□□ 0.85
SHISA9B4DS77 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SHISA9B4DS77 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
SHISA9B4DS77 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC20.39■□□□□ 0.85
SHISA9B4DS77 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SHISA9B4DS77 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SHISA9B4DS77 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SHISA9B4DS77 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC20.38■□□□□ 0.85
SHISA9B4DS77 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
SHISA9B4DS77 MIR4281-201ENST00000580852 62 ntBASIC20.38■□□□□ 0.85
SHISA9B4DS77 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SHISA9B4DS77 ERN1-208ENST00000606895 2068 ntBASIC20.38■□□□□ 0.85
SHISA9B4DS77 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SHISA9B4DS77 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SHISA9B4DS77 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SHISA9B4DS77 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SHISA9B4DS77 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC20.37■□□□□ 0.85
SHISA9B4DS77 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC20.37■□□□□ 0.85
SHISA9B4DS77 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SHISA9B4DS77 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SHISA9B4DS77 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SHISA9B4DS77 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SHISA9B4DS77 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SHISA9B4DS77 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SHISA9B4DS77 AC021242.3-201ENST00000607598 1377 ntBASIC20.36■□□□□ 0.85
SHISA9B4DS77 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC20.36■□□□□ 0.85
SHISA9B4DS77 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SHISA9B4DS77 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC20.36■□□□□ 0.85
SHISA9B4DS77 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SHISA9B4DS77 AC011551.1-201ENST00000614101 683 ntBASIC20.36■□□□□ 0.85
SHISA9B4DS77 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SHISA9B4DS77 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
SHISA9B4DS77 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC20.36■□□□□ 0.85
SHISA9B4DS77 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SHISA9B4DS77 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC20.36■□□□□ 0.85
SHISA9B4DS77 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC20.36■□□□□ 0.85
SHISA9B4DS77 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SHISA9B4DS77 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC20.35■□□□□ 0.85
SHISA9B4DS77 AC096887.2-201ENST00000623443 1957 ntBASIC20.35■□□□□ 0.85
SHISA9B4DS77 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
SHISA9B4DS77 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC20.35■□□□□ 0.85
SHISA9B4DS77 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SHISA9B4DS77 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC20.35■□□□□ 0.85
SHISA9B4DS77 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
SHISA9B4DS77 AL121749.1-202ENST00000609313 2153 ntBASIC20.35■□□□□ 0.85
SHISA9B4DS77 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SHISA9B4DS77 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SHISA9B4DS77 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SHISA9B4DS77 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
SHISA9B4DS77 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
SHISA9B4DS77 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC20.34■□□□□ 0.85
SHISA9B4DS77 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC20.34■□□□□ 0.85
SHISA9B4DS77 UNC93B8-201ENST00000511903 705 ntBASIC20.34■□□□□ 0.85
SHISA9B4DS77 GRAMD4P7-201ENST00000578182 1232 ntBASIC20.34■□□□□ 0.85
SHISA9B4DS77 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SHISA9B4DS77 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC20.34■□□□□ 0.85
SHISA9B4DS77 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SHISA9B4DS77 FOXO3B-201ENST00000395675 1928 ntBASIC20.33■□□□□ 0.85
SHISA9B4DS77 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SHISA9B4DS77 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC20.33■□□□□ 0.85
SHISA9B4DS77 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC20.33■□□□□ 0.85
SHISA9B4DS77 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC20.33■□□□□ 0.85
SHISA9B4DS77 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC20.33■□□□□ 0.85
SHISA9B4DS77 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
SHISA9B4DS77 GAK-223ENST00000628912 497 ntTSL 5 BASIC20.33■□□□□ 0.85
SHISA9B4DS77 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC20.33■□□□□ 0.85
SHISA9B4DS77 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SHISA9B4DS77 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
SHISA9B4DS77 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC20.33■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms